Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 960 a.a., formate dehydrogenase alpha subunit from Agrobacterium fabrum C58

 Score =  190 bits (483), Expect = 3e-52
 Identities = 139/521 (26%), Positives = 246/521 (47%), Gaps = 47/521 (9%)

Query: 66  TICSHCSVGCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERRLKYPMKL 125
           T C++C VGC   AE++        P  D   N G  C KG     +     R+  PM  
Sbjct: 254 TTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYATHRDRILNPMIR 313

Query: 126 E--GGKWKKISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRKMASL-WG 182
           E  G  W+++SW+ A   +  +  +I+ + G +S+  + S++ +NE+ +L +K+    +G
Sbjct: 314 ENIGDPWREVSWDAAFAYVASEFRRIQGKYGRESIGGITSSRCTNEETFLVQKLVRAGFG 373

Query: 183 TNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAMQHIL 242
            NNVD  AR+CHS T  G+   +G  A T +F+ +     +L IG+NP + HPV     L
Sbjct: 374 NNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEQSDVVLVIGANPTDGHPVFGSR-L 432

Query: 243 IAKEKNSCKIVVADPRR---TRTA-AKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDKEY 298
             + +   K++V DPRR    RT   +A + + L PG++VA +  +   +      ++ +
Sbjct: 433 KKRLRQGAKLIVIDPRRIDLVRTPHVEAAFHLPLLPGTNVAVLTALAHVIVTEGLFNEAF 492

Query: 299 IRQRV--FGMDEIRAEVAK--WTPAEVERVTGVSEEEVYNTAKTLAENRPGCVVWCMGGT 354
           IR+R      ++  A VA+   +P E ER TGV  E++   A+  A    G + + +G T
Sbjct: 493 IRERCDWSEFEDWAAFVAEPQHSPEETERFTGVPAEDLRGAARLYATGGNGAIYYGLGVT 552

Query: 355 QHTTGNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEG 414
           +H+ G+    A   L +  GNIG+ G G N  RG +NVQG+ D+G     LPGY  +++ 
Sbjct: 553 EHSQGSTTVMAIANLAMVTGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDD 612

Query: 415 SWKH-WASVWGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKDNLQQRENIR 473
           + +  +  +WGV                      PG+ +   +D  ++         + +
Sbjct: 613 ATRDVFEKLWGVKLN-----------------NEPGLRIPNMLDAAVDG--------SFK 647

Query: 474 AMFYWGHAV-NSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVMNDRTDGVYL-LPATTQFE 531
            ++  G  +  S      +   +  ++ +V+ D +      +N+  +  ++ LP +T  E
Sbjct: 648 GIYIQGEDILQSDPDTKHVSAGLAAMECVVVHDLF------LNETANYAHVFLPGSTFLE 701

Query: 532 TYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYLLSQKLGI 572
             G+ T + R I    +V+ P      D E+   L+Q +G+
Sbjct: 702 KDGTFTNAERRINRVRKVMSPK-NGYADWEVTQKLAQAMGL 741



 Score = 51.6 bits (122), Expect = 2e-10
 Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 815 YPIILTSGRLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEK 874
           +P++LT+GR++     G +TR    +   +++  +E++P DA   G  DGD  W++   +
Sbjct: 819 FPLLLTTGRILSQYNVGAQTRRTENVVWHEEDR-LEIHPHDAEQRGVKDGD--WIKLVSR 875

Query: 875 -GRIKVKAMVTRRVKPGMAFLPFHFGG 900
            G   ++A++T RV PG+ +  FH  G
Sbjct: 876 SGDTTLRALITDRVAPGVVYTTFHHPG 902