Pairwise Alignments

Query, 202 a.a., formate dehydrogenase iron-sulfur subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., hydrogenase 2 4Fe-4S ferredoxin-type component from Escherichia coli BL21

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 39/195 (20%)

Query: 7   LCDTKRCIECNGCVTACKN---------------ENDDALEWGIQRRRVVTLNDG----- 46
           L D+  C+ C  CVT C++                ND    +     +V T   G     
Sbjct: 41  LYDSTLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQ 100

Query: 47  -EPGENSISVACMHCTDAPCMAVCPADCFVHT-EDGIVLHNKDLCIGCGYCLFACPFGAP 104
            E G   I   CMHC D  C++VCP        + GIV ++KD+C GC YC+ ACP+  P
Sbjct: 101 EENGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP 160

Query: 105 QFPKQAAFGERGKMDKCTFCAGGPETEPGSEEERRKYGANRIAEGKLPMCASLCSTKALL 164
           ++     F   G + KC  C               + G  R+ +G LP C  +C   A++
Sbjct: 161 KYDYNNPF---GALHKCELC--------------NQKGVERLDKGGLPGCVEVCPAGAVI 203

Query: 165 AGDAEKISDIFRQRV 179
            G  E++    ++R+
Sbjct: 204 FGTREELMAEAKKRL 218



 Score = 27.3 bits (59), Expect = 3e-04
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 12/92 (13%)

Query: 82  VLHNKDLCIGCGYCLFACPFGAPQFPKQAAFGER--GKMDKCT--------FCAGGPETE 131
           +L++  LC+GC  C+  C      FP++   GE+     DK +            G    
Sbjct: 40  MLYDSTLCVGCQACVTKCQ--DINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVN 97

Query: 132 PGSEEERRKYGANRIAEGKLPMCASLCSTKAL 163
              EE    Y   +      P C S+C   AL
Sbjct: 98  KDQEENGYAYIKKQCMHCVDPNCVSVCPVSAL 129