Pairwise Alignments

Query, 160 a.a., nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 161 a.a., YajQ family cyclic di-GMP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  163 bits (413), Expect = 1e-45
 Identities = 85/161 (52%), Positives = 115/161 (71%), Gaps = 1/161 (0%)

Query: 1   MPSFDIVSEIDAVELRNAVENSTRELASRFDFRNVDASFELKEETVKLAAEDDFQLGQMM 60
           MPSFD+VSE + +E++NA+E S +E+++RFDF+  DA  E KE  +   A+D+F+LGQ+ 
Sbjct: 1   MPSFDVVSEANMIEVKNAIEQSNKEISTRFDFKGSDARVEQKERELTAFADDEFKLGQVK 60

Query: 61  DILRGNLAKRGVDARAMKAKDSVHIGKNWYKEA-EFKQGLEALLAKKIVKLIKDAKIKVQ 119
           D+L   +AKR VD R +       IG +  K+    K+G+   LAKKIVKL+KD+KIKVQ
Sbjct: 61  DVLVSKMAKRNVDVRFLDYGKIEKIGGDKVKQVVTVKKGVSGDLAKKIVKLVKDSKIKVQ 120

Query: 120 ASIQGDKVRVTGKKRDDLQEVMAMLREANLEQPLQYNNFRE 160
           ASIQGD VRVTG KRDDLQ V+AMLR+   + PL +NNFR+
Sbjct: 121 ASIQGDAVRVTGTKRDDLQSVIAMLRKDVTDTPLDFNNFRD 161