Pairwise Alignments

Query, 160 a.a., nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., YajQ family cyclic di-GMP-binding protein from Pectobacterium carotovorum WPP14

 Score =  192 bits (487), Expect = 3e-54
 Identities = 98/163 (60%), Positives = 129/163 (79%), Gaps = 3/163 (1%)

Query: 1   MPSFDIVSEIDAVELRNAVENSTRELASRFDFRNVDASFELKE--ETVKLAAEDDFQLGQ 58
           MPSFDIVSEID  E+RNAVEN+TR+L++R+DFRNV ASFEL E  +++K+A+E DFQ+ Q
Sbjct: 1   MPSFDIVSEIDMQEVRNAVENATRDLSTRWDFRNVPASFELNEKSQSIKVASESDFQVQQ 60

Query: 59  MMDILRGNLAKRGVDARAMKAKDSV-HIGKNWYKEAEFKQGLEALLAKKIVKLIKDAKIK 117
           ++DI+R  L KRG++  A++  +   H GK +  EA+ KQG+E   AKKIVKLIKD+K+K
Sbjct: 61  LIDIMREKLLKRGIEGGALEVPEEFEHSGKTYSVEAKLKQGIETTQAKKIVKLIKDSKLK 120

Query: 118 VQASIQGDKVRVTGKKRDDLQEVMAMLREANLEQPLQYNNFRE 160
           VQA IQG++VRVTGK RDDLQ VMA++R  NL QP Q+ NFR+
Sbjct: 121 VQAQIQGEQVRVTGKSRDDLQGVMALIRGGNLGQPFQFTNFRD 163