Pairwise Alignments

Query, 160 a.a., nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., YajQ family cyclic di-GMP-binding protein from Erwinia tracheiphila SCR3

 Score =  187 bits (476), Expect = 5e-53
 Identities = 93/163 (57%), Positives = 127/163 (77%), Gaps = 3/163 (1%)

Query: 1   MPSFDIVSEIDAVELRNAVENSTRELASRFDFRNVDASFELKE--ETVKLAAEDDFQLGQ 58
           MPSFDIVSEID  E++NAVEN+ RE++SRFDFRNV AS+EL E  E++K+ +E DFQ+ Q
Sbjct: 1   MPSFDIVSEIDMQEVKNAVENANREVSSRFDFRNVTASYELNEKNESIKVLSESDFQVKQ 60

Query: 59  MMDILRGNLAKRGVDARAMKAKDSV-HIGKNWYKEAEFKQGLEALLAKKIVKLIKDAKIK 117
           ++DILR  L KRG++  A++  + + H GK W  +A+ K+G+   +AKK+VKLIKD+K+K
Sbjct: 61  LVDILREKLLKRGIEGGAIEVPEEIEHSGKTWAVDAQLKKGIPTDVAKKLVKLIKDSKLK 120

Query: 118 VQASIQGDKVRVTGKKRDDLQEVMAMLREANLEQPLQYNNFRE 160
           VQ+ IQG++VRVTGK RDDLQ  MA++R  NL QP Q+ NFR+
Sbjct: 121 VQSQIQGEEVRVTGKSRDDLQSAMALVRGGNLGQPFQFKNFRD 163