Pairwise Alignments

Query, 160 a.a., nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., YajQ family cyclic di-GMP-binding protein from Dickeya dianthicola ME23

 Score =  193 bits (490), Expect = 1e-54
 Identities = 99/163 (60%), Positives = 132/163 (80%), Gaps = 3/163 (1%)

Query: 1   MPSFDIVSEIDAVELRNAVENSTRELASRFDFRNVDASFELKE--ETVKLAAEDDFQLGQ 58
           MPSFDIVSEID  E+RNAVEN+TREL +R+DFRNV ASF+L E  +T+K A+E DFQ+ Q
Sbjct: 1   MPSFDIVSEIDMQEVRNAVENATRELGTRWDFRNVPASFDLNEKAQTIKAASESDFQVKQ 60

Query: 59  MMDILRGNLAKRGVDARAMKAKDSV-HIGKNWYKEAEFKQGLEALLAKKIVKLIKDAKIK 117
           +++ILR  LAKRG++  +++  + + H GK +  EA+ KQG+EA LAKKIVKLIKD+K+K
Sbjct: 61  LIEILREKLAKRGIEGGSLEIPEEMEHSGKTYSVEAKLKQGIEATLAKKIVKLIKDSKLK 120

Query: 118 VQASIQGDKVRVTGKKRDDLQEVMAMLREANLEQPLQYNNFRE 160
           VQA  QG++VRVTGK RDDLQ V+A++R A+L QP ++NNFR+
Sbjct: 121 VQAQTQGEQVRVTGKSRDDLQGVIALVRGADLGQPFRFNNFRD 163