Pairwise Alignments

Query, 277 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  259 bits (662), Expect = 5e-74
 Identities = 133/279 (47%), Positives = 183/279 (65%), Gaps = 3/279 (1%)

Query: 1   MINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPEGIE--IGQFIDVFLYFDSENQ 58
           M  +G+ NSL++VK  +FG++LD G  G  LLP R++P+  E  +  +++VF+Y DSE+Q
Sbjct: 1   MALLGRYNSLQIVKHVDFGLYLDGGADGEILLPGRYIPKNAETEVDDWLNVFIYLDSEDQ 60

Query: 59  LAATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSEQRARFTAGQTVLVYV 118
           L ATTE P  QVGE+  +K++ +N  G F +WG+ +KDLL+PYSE+      G   +V+V
Sbjct: 61  LIATTEKPKVQVGEFASLKVKDINGAGIFLDWGL-SKDLLMPYSEEARPLKIGDYCVVHV 119

Query: 119 YTDKASGRIVGTTKFNKWLDKTPAKYTPNQQVDLLIAERSELGFKAIVNGTHWGMIFSSD 178
           Y DK + RI  T++ +++LD TPA Y   Q V+LL+A  + +GFKAI+N  HWG+I  ++
Sbjct: 120 YLDKRTRRITATSRLDRYLDVTPADYKVGQPVELLVAGETPMGFKAIINNRHWGLIHKNE 179

Query: 179 VFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELSTKILETLEKKGGFLPLSDKS 238
           VF  L  G   KG+IK VR+DGKI LSLQ VG    D L  +I+  LE +GG L + DKS
Sbjct: 180 VFKFLRSGMHEKGFIKEVRQDGKISLSLQPVGAALADTLQEQIMARLEAEGGVLGVCDKS 239

Query: 239 TPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRLA 277
            P  I   F  SKG FKK IGGL+KQG IVI +D I  A
Sbjct: 240 DPALISKLFNVSKGNFKKAIGGLFKQGLIVIHDDRIEKA 278