Pairwise Alignments

Query, 277 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  191 bits (486), Expect = 1e-53
 Identities = 112/293 (38%), Positives = 159/293 (54%), Gaps = 18/293 (6%)

Query: 1   MINIGQINSLEVVKFAEFGVFL-----------------DAGEYGTTLLPKRFVPEGIEI 43
           MINIG+IN+L VV    FG  L                 DA E  T  L    V   +  
Sbjct: 12  MINIGKINTLRVVAQYPFGYALAPLVENNDENDCVIEIDDAEELQTVTLAIDEVETSLAE 71

Query: 44  GQFIDVFLYFDSENQLAATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSE 103
           GQ IDVF+  D    L AT + P+ QVGE  ++K     + GAF +WG+ N DLL+P   
Sbjct: 72  GQQIDVFVATDQRGDLYATIKKPLIQVGETKVLKAVSATNFGAFFDWGLDN-DLLMPNDY 130

Query: 104 QRARFTAGQTVLVYVYTDKASGRIVGTTKFNKWLDKTPAKYTPNQQVDLLIAERSELGFK 163
           Q      G   +V+ + D  + RI+G TK + +L ++ A       V  L+  +++LGFK
Sbjct: 131 QAQPVNPGMYYVVHTFFDDKTQRILGATKLHYFLKESSAYLNEGDTVQCLVYAKTDLGFK 190

Query: 164 AIVNGTHWGMIFSSDVFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELSTKILE 223
            ++N    G+IF SD F  L +G+  +G IK++R+DGK+D++LQ++     D L   IL+
Sbjct: 191 VVINEKSLGLIFHSDAFKPLKVGQATEGVIKTIRDDGKVDVALQRIDKGGRDALQQAILD 250

Query: 224 TLEKKGGFLPLSDKSTPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRL 276
            LE  GG   L+DKS PEAI++ F  SK  +KK +G LYKQ KI +  D +RL
Sbjct: 251 DLEAHGGISTLTDKSAPEAIYSHFNVSKAAYKKALGALYKQKKITLSPDAVRL 303