Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) from Variovorax sp. SCN45

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 1/137 (0%)

Query: 149 VLDMAAAPGSKTTQMAALMDNQGV-LVANEFSASRVKVLHANIERCGIRNTALSNFDGCV 207
           VLD  AAPG KT  +  L     + + A E  A R + +   + R G++   L       
Sbjct: 244 VLDACAAPGGKTAHLLELAGPDAIDVTALEVDAVRSRRIDETLARIGLKARVLVADAARP 303

Query: 208 FGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVG 267
              W    FDA+L+DAPC+  G +R+ PD            ++  Q AL+ + +  ++ G
Sbjct: 304 ADWWDRTPFDAILLDAPCTASGIVRRHPDVRWLRRESDTAQLSAQQAALLAALWPLVRTG 363

Query: 268 GTLVYSTCTLSREENQQ 284
           G L+Y TC++ REE  Q
Sbjct: 364 GRLLYCTCSVFREEGSQ 380