Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 7/242 (2%)

Query: 52  PTQLADFIAACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESL 111
           P Q    + A        +RVN    + AE+     +     TP    E+   ++    +
Sbjct: 155 PEQWQQIVEANNSKAPMWLRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPCDV 214

Query: 112 VPLGNTAEHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQG 171
             L   AE   G   +Q+A++ + ++  ++     + +LD  AAPG KT  +        
Sbjct: 215 HQLPGFAE---GWVSVQDAAAQLALT--YLAPQAGELILDCCAAPGGKTAHILERTPESQ 269

Query: 172 VLVANEFSASRVKVLHANIERCGIRNTALSNFDGCVFGGWLPERFDAVLIDAPCSGEGTI 231
           V VA +   +R+K +  N++R  +    +          W  E+FD +L+DAPCS  G I
Sbjct: 270 V-VAIDCDETRLKRVRENLQRLELTAQVICGDARYPQQWWQGEQFDRILLDAPCSATGVI 328

Query: 232 RKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQ-QVCWHLK 290
           R+ PD       + I ++A  Q+ ++++ +Q LK GG+LVY+TC+++ +EN+ QV   L+
Sbjct: 329 RRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLE 388

Query: 291 QT 292
           +T
Sbjct: 389 RT 390