Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., RsmB/NOP family class I SAM-dependent RNA methyltransferase from Paraburkholderia sabiae LMG 24235

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 12/289 (4%)

Query: 54  QLADFIAACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESLVP 113
           ++A   AA   P    +R N +K S  +     ++   +    P+   G  +     L  
Sbjct: 137 EIAHLAAALNYPAPLDLRANPIKASRDDVLGALSKAGIEAGATPYAPLGVRVVGKPPLTK 196

Query: 114 LGNTAEHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVL 173
           L    +   G   +Q+  S +  +   +     + ++D  A  G KT  + A M + G L
Sbjct: 197 LDAFQD---GWLEVQDEGSQLLCT--LVAPKRGEMIVDFCAGAGGKTLALGAAMRSTGRL 251

Query: 174 VANEFSASRVKVLHANIERCGIRNT--ALSNFDGCVFGGWLPERFDAVLIDAPCSGEGTI 231
            A + S  R+  L   + R G+ N    L + +       L  + D VL+DAPCSG GT+
Sbjct: 252 YAFDISDRRLAKLKPRLARSGLSNVNPVLIDSEHDAKIKRLAGKIDRVLVDAPCSGLGTL 311

Query: 232 RKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQ 291
           R++PD     S ESI  +   Q +++ SA + +K GG LVY+TC++   EN+ V   +KQ
Sbjct: 312 RRNPDLKWRQSPESIAELTPKQLSILTSAARLVKKGGRLVYATCSILDAENEGV---VKQ 368

Query: 292 TYGDAVSFESL--GNLFEHASLALTEEGFLHIFPQMYDCEGFFVAKIRK 338
              D   FE +   ++     + L    FL ++P  +  +GFF A + +
Sbjct: 369 FLADHPDFELVPARDVLAEQRVELEMGDFLSLWPHRHSTDGFFAAVLER 417