Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., methyltransferase domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  108 bits (270), Expect = 4e-28
 Identities = 84/273 (30%), Positives = 126/273 (46%), Gaps = 10/273 (3%)

Query: 70  IRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESLVPLGNTAEHMAGLFYIQE 129
           +RVNTLK +  E  +  A++  +  P      G  + A    VPL        GL  +Q+
Sbjct: 171 LRVNTLKATRDEAIRALAKEGIKAEPTALSPIGLRLGAR---VPLVQVQAWRNGLIEVQD 227

Query: 130 ASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASRVKVLHAN 189
             S +   AL        +V+D  A  G KT  +AA M N+G LVA + +  RV      
Sbjct: 228 EGSQLV--ALLTDPKPGQAVVDYCAGAGGKTLALAAAMQNKGRLVACDVAEWRVDRAQDR 285

Query: 190 IERCGIRNTALSNFDGCVFGGWLPER---FDAVLIDAPCSGEGTIRKDPDAMKNWSLESI 246
           + R G+ N      +G     W+      FD VL+DAPC+G GT R++PDA   +S   +
Sbjct: 286 LRRAGVHNVTRRVIEG-ESDKWIKRSAGSFDRVLVDAPCTGTGTWRRNPDAKWQFSETDL 344

Query: 247 QSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSFESLGNLF 306
             +   Q A+++SA +  K GG L+Y+TC++ REEN+         + D           
Sbjct: 345 LELVARQGAILDSAARLTKPGGRLIYATCSIMREENEDRIEAFLAAHPDYRPVPVPELWA 404

Query: 307 EHASLALTEEG-FLHIFPQMYDCEGFFVAKIRK 338
           E A       G +L + PQ +  +GFF A + K
Sbjct: 405 ELAGTPCPVGGPWLRLSPQAHGTDGFFAAVLEK 437