Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., MFS transporter from Magnetospirillum magneticum AMB-1

 Score =  105 bits (261), Expect = 4e-27
 Identities = 76/229 (33%), Positives = 117/229 (51%), Gaps = 26/229 (11%)

Query: 123 GLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASR 182
           G ++IQ+A++ +P  A  +G+    +V D+ AAPG K  Q+A    +   L A + SA R
Sbjct: 218 GAWWIQDAAAALP--ARLLGDVRGKAVADLCAAPGGKALQLAVAGAD---LTALDRSAKR 272

Query: 183 VKVLHANIERCGIRNTALSNFDGCVFGGWLPER-FDAVLIDAPCSGEGTIRKDPDAMKNW 241
           +    AN++R G++   +        G W P   FDA+L+DAPCS  GT+R+ PD  ++ 
Sbjct: 273 LVRFTANLKRLGLKAKVVE----ADAGAWTPPAPFDAILLDAPCSATGTLRRHPDVARHK 328

Query: 242 SLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDA----- 296
           +   +  +A  Q  L+++A   LK GGTLVY TC+L  EE  +    L    G A     
Sbjct: 329 NPAEVMKLAGVQARLLQAAIPMLKPGGTLVYCTCSLEAEEGPEQIAAL--LAGGAPLRRV 386

Query: 297 -VSFESLGNLFEHASLALTEEGFLHIFPQMYDCEG----FFVAKIRKLA 340
            +  E +G L E     +T EG L   P     +G    FF A++ K++
Sbjct: 387 PIRPEEVGGLAE----LITPEGDLRTLPCHLASQGGMDAFFAARLEKVS 431