Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) from Escherichia coli BW25113

 Score = 91.3 bits (225), Expect = 6e-23
 Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 15/217 (6%)

Query: 123 GLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASR 182
           G   +Q+AS+   ++ L   N  +  +LD+ AAPG KTT +  +     V VA +    R
Sbjct: 226 GWVTVQDASAQGCMTWLAPQNGEH--ILDLCAAPGGKTTHILEVAPEAQV-VAVDIDEQR 282

Query: 183 VKVLHANIERCGIRNTALSNFDGCVFGGWLPER-FDAVLIDAPCSGEGTIRKDPDAMKNW 241
           +  ++ N++R G++ T     DG     W  E+ FD +L+DAPCS  G IR+ PD     
Sbjct: 283 LSRVYDNLKRLGMKATVKQG-DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLR 341

Query: 242 SLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSFES 301
               I  +A  Q  ++++ +  LK GGTLVY+TC++  EEN        Q   DA     
Sbjct: 342 RDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADA----- 396

Query: 302 LGNLFEHASLALTEEGFLHIFPQMYDCEGFFVAKIRK 338
                E       E+      P   + +GFF AK+ K
Sbjct: 397 -----ELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428