Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., NOL1/NOP2/sun family putative RNA methylase from Enterobacter asburiae PDN3

 Score =  543 bits (1398), Expect = e-159
 Identities = 271/472 (57%), Positives = 339/472 (71%), Gaps = 5/472 (1%)

Query: 34  NISLPEPFIASMAKILPDPTQLADFIAACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQL 93
           ++ LPE F+A M + LP    L DFIAACQRPLR+SIRVNTLKISV +F    +   WQL
Sbjct: 5   SVFLPEQFLAQMREALPSHLSLDDFIAACQRPLRRSIRVNTLKISVDDFLALVSPYGWQL 64

Query: 94  TPVPWCENGFWIDAD-ESLVPLGNTAEHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDM 152
           TPVPWC  GFWI+ D E+ +PLG+TAEH++GLFYIQEASSM+PV+ALF      + V+D+
Sbjct: 65  TPVPWCAEGFWIERDDEASLPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPERVMDV 124

Query: 153 AAAPGSKTTQMAALMDNQGVLVANEFSASRVKVLHANIERCGIRNTALSNFDGCVFGGWL 212
           AAAPGSKTTQ+AA M N G ++ANEFSASRVKVLHANI RCGI N AL++FDG VFG  L
Sbjct: 125 AAAPGSKTTQIAARMGNHGAILANEFSASRVKVLHANISRCGIHNVALTHFDGRVFGAAL 184

Query: 213 PERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVY 272
           PE FDA+L+DAPCSGEG +RKDPDA+KNWS+ES   IA TQ+ LIESAF AL+ GGTLVY
Sbjct: 185 PEAFDAILLDAPCSGEGVVRKDPDALKNWSVESNLEIAATQRELIESAFHALRPGGTLVY 244

Query: 273 STCTLSREENQQVCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYDCEGFF 332
           STCTL+R+EN+ VC  LK  Y DAV F  L +LF  A  A+T EGFLH+FPQ+YDCEGFF
Sbjct: 245 STCTLNRDENEDVCLWLKANYPDAVEFLPLNDLFASAQEAVTPEGFLHVFPQIYDCEGFF 304

Query: 333 VAKIRKLASV-PTPEVNKRLGKFPFNKASHKQQAEIAQQLHKSLGIELPSDAQVWLRDND 391
           VA++RK  +V P P    ++G FPF     +  A++ +   K +G+        W+RD +
Sbjct: 305 VARLRKTQAVEPLPTPKFKVGNFPFAPLKGRDAAQL-EAAAKKVGLVWDESLHPWMRDKE 363

Query: 392 VWLFPEALEPLLGELRFSRMGIKIAEAHKSGYRWQHQVATCLASSSASHSVELDTTQARE 451
           +WLFP  +EPL+G++RFSR+GI++AE H  GYRWQH+    LA     ++  L   +A E
Sbjct: 364 IWLFPAQIEPLIGKVRFSRIGIRLAEVHNKGYRWQHEAVIALA--GRENTFALTHQEAEE 421

Query: 452 WFMGRDVRPEGQSGQGEVIIRYANDVIGLGKWVGNRVKNGLPRELVRDKNLF 503
           W+ GRDV P+      EVI+ Y    +GL K VG+R+KN  PRELVRD  LF
Sbjct: 422 WYRGRDVYPDSTPSGDEVIVTYQGYPLGLAKKVGSRLKNSYPRELVRDGRLF 473