Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Dickeya dianthicola ME23

 Score = 97.4 bits (241), Expect = 9e-25
 Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 15/217 (6%)

Query: 123 GLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASR 182
           G   +Q+AS+   +   ++    ++ +LD+ AAPG KTT +     +  VL A +    R
Sbjct: 226 GWVTVQDASAQGCIH--WLSPQDHEDILDLCAAPGGKTTHILEAAPHAHVL-AVDVDEQR 282

Query: 183 VKVLHANIERCGIRNTALSNFDGCVFGGWLPER-FDAVLIDAPCSGEGTIRKDPDAMKNW 241
           +K +  N++R G ++  +   DG     W  ++ FD +L+DAPCS  G IR+ PD     
Sbjct: 283 LKRVRENLQRLG-QHAEVRCGDGRTPTEWCGDKLFDRILLDAPCSATGVIRRHPDIKWLR 341

Query: 242 SLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSFES 301
               I  +A+ Q+A++E+ +  LK GGTLVY+TC++  EEN Q      Q + DA   ++
Sbjct: 342 RDSDIAELASLQQAILEAIWPRLKSGGTLVYATCSILPEENHQQVAAFLQRHPDAALVDT 401

Query: 302 LGNLFEHASLALTEEGFLHIFPQMYDCEGFFVAKIRK 338
                        E   +   P   D +GFF AK+ K
Sbjct: 402 ----------GSPEHPGIQKLPSAEDGDGFFYAKLVK 428