Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Sun protein from Agrobacterium fabrum C58

 Score = 87.8 bits (216), Expect = 7e-22
 Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 13/219 (5%)

Query: 123 GLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASR 182
           G +++Q+ ++ MPV  L  G+     V D+ AAPG KT Q+A        + A + S +R
Sbjct: 252 GAWWVQDLAASMPVRLL--GDISGKRVADLCAAPGGKTAQLALAGAR---VTALDQSGNR 306

Query: 183 VKVLHANIERCGIR-NTALSNFDGCVFGGWLPER-FDAVLIDAPCSGEGTIRKDPDAMKN 240
           ++ L  N++R G+   T  +N        + PE+ FDAVL+DAPCS  GT+RK PD    
Sbjct: 307 LRRLRENLDRLGLHAETVEANMLK-----YQPEQLFDAVLLDAPCSSTGTLRKHPDVCWT 361

Query: 241 WSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSFE 300
                I  +A  Q  ++  A   +  GG +V+S C+L   E +++   +     D     
Sbjct: 362 KDENDIAKLAALQGQMLRHALTLVGPGGLVVFSNCSLDPSEGEEMIAEVLAENPDVERVA 421

Query: 301 SLGNLFEHASLALTEEGFLHIFPQMY-DCEGFFVAKIRK 338
                +     A++  G L   P M+   +GFF + +RK
Sbjct: 422 VHREDWPGMEAAISAAGDLRTTPDMFGGVDGFFSSVLRK 460