Pairwise Alignments

Query, 879 a.a., MCE family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., Intermembrane transport protein PqiB from Azospirillum sp. SherDot2

 Score =  192 bits (488), Expect = 5e-53
 Identities = 104/328 (31%), Positives = 178/328 (54%), Gaps = 13/328 (3%)

Query: 2   SQENTTQTSYTPEIRK--RRGISPLWILPIVTMILAGWLVFKAVHDAGVRIQIHFENAQG 59
           S  N     + PE+    RR +SPLW+LP+V  ++AGWL ++   + G +I I F++  G
Sbjct: 15  SPANHPSAGHPPEVATPPRRRLSPLWLLPLVAALIAGWLGWRWFEERGPQIVITFQSGDG 74

Query: 60  LIAGRTTIRYQGLEVGMVRDIKLSEGLDSIYVEADIYPEATKLLSNQTRFWMVKPTASLS 119
           L AGRT I+++ +++G++  ++LS+ L  +   A +   A + L + TRFW+V P   L 
Sbjct: 75  LEAGRTRIKHKNVDLGVIESVRLSDDLSQVIATARMDRTADRHLKDGTRFWVVAPRLGLG 134

Query: 120 GVSGLDALVSGNYIAIQPGSTHQEDYPTQYQALDSAPSDLLAQRGLTISLKARDLGGISV 179
           GVSGL  +VSG Y+ ++PG     D   ++ ALD  P       G + +LK   LG ++ 
Sbjct: 135 GVSGLSTVVSGTYVEMEPGG---GDDRREFDALDEPPVVRADVPGRSFNLKTEQLGSLAQ 191

Query: 180 GSQIVYKKIPIGEVFSYQLDDDAQSVIIQASIKEEYQHIINTESRFWNVSGIGASIGFEG 239
           GS + ++ + +GEV  Y L    +SV +   ++  Y+ +++  SRFW  SGI  S G +G
Sbjct: 192 GSPVYFRGVQVGEVMGYNLSPQDRSVSVAIFVRAPYEGLVHEGSRFWRSSGIQFSAGADG 251

Query: 240 VDVRLESLSALIGGSIAVDSPDEGKPVEQN---AQFRLYRDLKTAGRG-----IAVSITL 291
           +  + ESL +L  G + +++P + +   Q+   A F LY D  +A        +   +  
Sbjct: 252 IKFQTESLKSLALGGVVLETPPDPEAGAQSLDWASFTLYEDQASAAAARDRLRVRYRLEF 311

Query: 292 PDDNNISASGAPIMYRGIEIGQITDLQL 319
           P       +GAP++ RG+ +G +  ++L
Sbjct: 312 PGSVQGLQAGAPVLMRGLTVGHVAAVRL 339



 Score =  102 bits (255), Expect = 5e-26
 Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 25/363 (6%)

Query: 283 RGIAVSITLPDDNNISASGAPIMYRGIEIGQITDLQLTENRKSIVASAAIQPAFSDMLNQ 342
           RG  + IT    + + A    I ++ +++G I  ++L+++   ++A+A +       L  
Sbjct: 61  RGPQIVITFQSGDGLEAGRTRIKHKNVDLGVIESVRLSDDLSQVIATARMDRTADRHLKD 120

Query: 343 GSQFVLEEAQVSLTGVENLTNLVKGNYLTLIPGAGERTRNFQAVRKNEFKYARSNSISFN 402
           G++F +   ++ L GV  L+ +V G Y+ + PG G+  R F A+ +     A     SFN
Sbjct: 121 GTRFWVVAPRLGLGGVSGLSTVVSGTYVEMEPGGGDDRREFDALDEPPVVRADVPGRSFN 180

Query: 403 LVADNSFGLEAGTPILYRGVAVGSVTAVNLKLD--YVEFNVLIDEQYGALIRSQNRFYVT 460
           L  +    L  G+P+ +RGV VG V   NL      V   + +   Y  L+   +RF+ +
Sbjct: 181 LKTEQLGSLAQGSPVYFRGVQVGEVMGYNLSPQDRSVSVAIFVRAPYEGLVHEGSRFWRS 240

Query: 461 GSAAAELTESGLSVSIPPAKQLLLGSISFAS----EGSSTPLE--QYRLYSSQSLAELAK 514
                     G+       K L LG +   +    E  +  L+   + LY  Q+ A  A+
Sbjct: 241 SGIQFSAGADGIKFQTESLKSLALGGVVLETPPDPEAGAQSLDWASFTLYEDQASAAAAR 300

Query: 515 YNQSGSRSLTLFAHELPSINAGSPLLYRNLKVGSISGFTLTPKGVQIEATIEKQYQHLLT 574
            ++   R    F   +  + AG+P+L R L VG ++   L     + E  I         
Sbjct: 301 -DRLRVRYRLEFPGSVQGLQAGAPVLMRGLTVGHVAAVRLVYDEAKEELHIPVDID--FE 357

Query: 575 PDTVFWNRSGVEIKASMDGVDVKAAPLQ------------TLIRGG--IAFDNLPGIENK 620
           PD V    + ++ K   +    K   +Q             LI G   ++FD  PG+   
Sbjct: 358 PDLVARTYAVIDGKPMDEAAVRKLVAMQVQKGLRARLASGNLITGQKLVSFDYAPGLPPS 417

Query: 621 VGS 623
            GS
Sbjct: 418 PGS 420



 Score = 98.2 bits (243), Expect = 1e-24
 Identities = 60/230 (26%), Positives = 116/230 (50%), Gaps = 6/230 (2%)

Query: 638 GEKITLTALGTLGVKVG-TPVQYQGVQIGEVFEIIPDFESDFVKLAARIEPQYAPKIAKQ 696
           G +I +T     G++ G T ++++ V +G +  +    +   V   AR++ + A +  K 
Sbjct: 62  GPQIVITFQSGDGLEAGRTRIKHKNVDLGVIESVRLSDDLSQVIATARMD-RTADRHLKD 120

Query: 697 NSQFWLSQAKIGLSGIENVQNLL-GQSIEVQPGNGESRFEFELHKE---ARHGGAGNTYT 752
            ++FW+   ++GL G+  +  ++ G  +E++PG G+ R EF+   E    R    G ++ 
Sbjct: 121 GTRFWVVAPRLGLGGVSGLSTVVSGTYVEMEPGGGDDRREFDALDEPPVVRADVPGRSFN 180

Query: 753 LQSEKRGSVSVGTPILYRDIEVGKVIDVRLGEFADRVITTIRIAPQYTYLLRQNSVFWNV 812
           L++E+ GS++ G+P+ +R ++VG+V+   L      V   I +   Y  L+ + S FW  
Sbjct: 181 LKTEQLGSLAQGSPVYFRGVQVGEVMGYNLSPQDRSVSVAIFVRAPYEGLVHEGSRFWRS 240

Query: 813 SGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLY 862
           SG+  S G  G   +  +  S+  GG+   TP   +    + +  +F LY
Sbjct: 241 SGIQFSAGADGIKFQTESLKSLALGGVVLETPPDPEAGAQSLDWASFTLY 290



 Score = 39.3 bits (90), Expect = 7e-07
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 21/149 (14%)

Query: 654 GTPVQYQGVQIGEVFEIIPDFESDFVKLAARIEPQYAPKIAKQNSQFWLS---QAKIGLS 710
           G+PV ++GVQ+GEV       +   V +A  +   Y   +  + S+FW S   Q   G  
Sbjct: 192 GSPVYFRGVQVGEVMGYNLSPQDRSVSVAIFVRAPYEG-LVHEGSRFWRSSGIQFSAGAD 250

Query: 711 GI----ENVQNL-LGQSIEVQPGNGESRFE------FELHKEARHGGAGNT---YTLQSE 756
           GI    E++++L LG  +   P + E+  +      F L+++     A         + E
Sbjct: 251 GIKFQTESLKSLALGGVVLETPPDPEAGAQSLDWASFTLYEDQASAAAARDRLRVRYRLE 310

Query: 757 KRGSVS---VGTPILYRDIEVGKVIDVRL 782
             GSV     G P+L R + VG V  VRL
Sbjct: 311 FPGSVQGLQAGAPVLMRGLTVGHVAAVRL 339