Pairwise Alignments

Query, 419 a.a., paraquat-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  265 bits (678), Expect = 2e-75
 Identities = 152/398 (38%), Positives = 229/398 (57%), Gaps = 6/398 (1%)

Query: 20  GQVRLCPGCELPIDAITVDQAHSAHCPRCGTLLYRGGSPSLSGDLALAVTCLLLFIPSHF 79
           G  + CP C++      ++   SA+CPRC   +  G   SL+   A+A T LLL   +  
Sbjct: 26  GDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWG 85

Query: 80  FSYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSSIAPLVLCLSVVSAHLALRF 139
              + I L G+ I A + QG++ +  +G      +V FC   APL+L  S+  A+L    
Sbjct: 86  EPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSI--AYLWFGN 143

Query: 140 RYFQTLRYSLLFIHHLKVWVMIDVFLVSVAVSCFKLKDYSDIFIGPGLLGLVLLQLFTVL 199
           R    LR  LL +  LK WVM+D++LV + V+  K++DY+ I  G GL   V L + T +
Sbjct: 144 RLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTV 203

Query: 200 LLSRISTRRYWETWQAETEYDLPVKQVH-CHNCHLS--QPENGHCVRCQHKLYHRKPNSI 256
            LS ++    WE +  +       +++  C  CH +    + G C RC   L  R+ +S+
Sbjct: 204 TLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSL 263

Query: 257 ERTWAYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVASLVKNGMWGIALIIFVASI 316
           ++ WA +LA+ V + PANL+PISI+  NG R EDTI SG+ SL  + +  +A I+F+ASI
Sbjct: 264 QKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNI-AVAGIVFIASI 322

Query: 317 VVPVIKIIGLAYLLMAIKLKRHVHQRQRMMIYRGIKWIGKWSVMDLFVISIMLTLVDRGQ 376
           +VP  K+I +  LL++I  K     R R+++ R + WIG+WS++DLFVIS+ ++L++R Q
Sbjct: 323 LVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQ 382

Query: 377 ILDFTPGYGAVAFGMVVVLTMLAAESLDPRLLWDEPDS 414
           IL FT G  A  FG  V+LT+LA E LD RLLWD  +S
Sbjct: 383 ILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHES 420