Pairwise Alignments

Query, 419 a.a., paraquat-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., membrane integrity-associated transporter subunit PqiA from Dickeya dianthicola ME23

 Score =  197 bits (502), Expect = 4e-55
 Identities = 125/411 (30%), Positives = 198/411 (48%), Gaps = 39/411 (9%)

Query: 24  LCPGCELPIDAITVDQAHSAHCPRCGTLLYRGGSPSLSGDLALAVTCLLLFIPSHFFSYI 83
           LCP C+L ++  T+     A CPRC T+L            + A + L++ + S  F ++
Sbjct: 13  LCPHCDLLVELPTLQDGQRAVCPRCKTVLSSRQREPRWRPASFAFSALIMLLLSMLFPFV 72

Query: 84  DIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSSIAPLVLCLSVVSAHLALRFRYFQ 143
            + + G+    TL +    +  E Y ++A L L  S + P   C   V   L LR     
Sbjct: 73  SMSVAGIRSEITLLEIPRVMVAENYASMATLFLLFSQLVPA--CSMAVILLLCLRVPLPD 130

Query: 144 TLRYSLL-FIHHLKVWVMIDVFLVSVAVSCFKLKDYSDIFIGPGLLGLVLLQLFTVLLLS 202
            +R      +  LK W M ++FL  V VS  KL  Y DI IG   +  +   L  +L   
Sbjct: 131 AVRRLFTKMLFQLKSWGMAEIFLAGVLVSFVKLMSYGDIGIGASFVPYIAFCLLQLLAFQ 190

Query: 203 RISTRRYW-------------ETWQAETEYD----------LPVKQVHCHNCHLSQPENG 239
            +  R  W             ET ++  E            LP  +V C  CH     +G
Sbjct: 191 SLDRRWLWDDVAPSPPMPAGLETGRSGLEQGARACTCCSAILPADEVRCPRCHT----HG 246

Query: 240 HCVRCQHKLYHRKPNSIERTWAYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVASL 299
           H          R+ +S++ T A +L + +   PANL+PI +    G  +  TI SGV  L
Sbjct: 247 HA---------RRRHSLQWTLALLLTSVLLYVPANLMPIMVTEALGHSITSTIMSGVILL 297

Query: 300 VKNGMWGIALIIFVASIVVPVIKIIGLAYLLMAIKLKRHVHQRQRMMIYRGIKWIGKWSV 359
             +G W +AL+IF+ASI+VP +K++ + +L    +  R     +   +Y  ++++G+WS+
Sbjct: 298 WDSGSWPVALVIFIASIMVPTLKMLAMGWLCWCAQGSRRYDTERLHRVYEVVEFVGRWSM 357

Query: 360 MDLFVISIMLTLVDRGQILDFTPGYGAVAFGMVVVLTMLAAESLDPRLLWD 410
           +D+FVI+++  +V  G+++   P  GAV F  VV+LTM+AA + DPRLLWD
Sbjct: 358 IDVFVIAVLSAMVRMGRLMSIYPAIGAVLFATVVILTMIAAMTFDPRLLWD 408



 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 14/220 (6%)

Query: 4   PPMTSSSSLSHHASQSGQVRLCPGCE--LPIDAITVDQAHSAHCPRCGTLLYRGGSPSLS 61
           PPM +         + G  R C  C   LP D +         CPRC T  +     SL 
Sbjct: 205 PPMPAGLETGRSGLEQG-ARACTCCSAILPADEV--------RCPRCHTHGHARRRHSLQ 255

Query: 62  GDLALAVTCLLLFIPSHFFSYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSSI 121
             LAL +T +LL++P++    +     G  I +T+  GV  LWD G   +AL++   S +
Sbjct: 256 WTLALLLTSVLLYVPANLMPIMVTEALGHSITSTIMSGVILLWDSGSWPVALVIFIASIM 315

Query: 122 APLVLCLSVV-SAHLALRFRYFQTLRYSLLF--IHHLKVWVMIDVFLVSVAVSCFKLKDY 178
            P +  L++      A   R + T R   ++  +  +  W MIDVF+++V  +  ++   
Sbjct: 316 VPTLKMLAMGWLCWCAQGSRRYDTERLHRVYEVVEFVGRWSMIDVFVIAVLSAMVRMGRL 375

Query: 179 SDIFIGPGLLGLVLLQLFTVLLLSRISTRRYWETWQAETE 218
             I+   G +    + + T++       R  W+    + E
Sbjct: 376 MSIYPAIGAVLFATVVILTMIAAMTFDPRLLWDRHHVQGE 415



 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 4/179 (2%)

Query: 233 LSQPENGHCVRCQHKLYHRKPNSIERTWAYVLAATVAIFPANLIPISILITNGQRLEDTI 292
           L   +   C RC+  L  R+     R  ++  +A + +  + L P   +   G R E T+
Sbjct: 26  LQDGQRAVCPRCKTVLSSRQREPRWRPASFAFSALIMLLLSMLFPFVSMSVAGIRSEITL 85

Query: 293 FSGVASLVKNGMWGIALIIFVASIVVPVIKIIGLAYLLMAIKLKRHVHQRQRMMIYRGIK 352
                 +V      +A +  + S +VP   +  +  L + + L   V +    M+++   
Sbjct: 86  LEIPRVMVAENYASMATLFLLFSQLVPACSMAVILLLCLRVPLPDAVRRLFTKMLFQ--- 142

Query: 353 WIGKWSVMDLFVISIMLTLVDRGQILDFTPGYGAVAFGMVVVLTMLAAESLDPRLLWDE 411
            +  W + ++F+  ++++ V      D   G   V +    +L +LA +SLD R LWD+
Sbjct: 143 -LKSWGMAEIFLAGVLVSFVKLMSYGDIGIGASFVPYIAFCLLQLLAFQSLDRRWLWDD 200