Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., Multidrug resistance ABC transporter ATP-binding/permease protein BmrA from Xanthobacter sp. DMC5

 Score =  216 bits (549), Expect = 3e-60
 Identities = 166/584 (28%), Positives = 278/584 (47%), Gaps = 27/584 (4%)

Query: 25  LITQVKKHRAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQGW 84
           L   +K++R ++  A    + A L ++ +P+ +  M+D       A  V+          
Sbjct: 33  LAPYLKRYRGRVAAALGALLAAALATLALPIAVRRMIDFGFAEDHAGLVDQ--------- 83

Query: 85  QTATGYIMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYE 144
                Y  + + +  V+ +AS     L     T + + +  ++R  +  +L  +    Y+
Sbjct: 84  -----YFGVLVAVAAVLALASAARYYL----VTTLGERVVSDLRTAVFARLVTLDGAFYD 134

Query: 145 TRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPI 204
           +  SG + + L  D   +   +G++ S  L +L+  IG+  +++    RL   +L+  PI
Sbjct: 135 SARSGELTSRLTADTTQLKSAVGASASTALRNLMMCIGSVAMMVVTSPRLSGLVLVAIPI 194

Query: 205 VIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAV 264
           ++      G +V+ L ++             E L+ +  L+AA+ E     R      AV
Sbjct: 195 IVLPLMASGRKVRRLTRQAQDTLADASAYAAEALNSMRALQAASAEGVARQRFDG---AV 251

Query: 265 RENADKYAWQSEAAGRLSFLLFLLGFELFRAVAML---MVVFSDLTIGQIFAVFGYLWFM 321
            E        ++A G L+ +   L F    AV       V+   +T G +     Y    
Sbjct: 252 EEAFGAARQATQARGWLTGIAIFLVFGSVVAVLWAGAQSVLAGTMTSGALGQFVLYAVLA 311

Query: 322 LSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFSY 381
            + +  L        AA  A +RI  LL++E + RP ++  P        I  + + FSY
Sbjct: 312 AASLGNLSETWGEMSAAAGAAERIGELLKVEPQVRPPARPVPLPARISGAIRFDEVSFSY 371

Query: 382 DG--ESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDI 439
               +   L  ++  I  G++VALVG SG GKST+ QLL   Y  Q+G I  +G    + 
Sbjct: 372 PTRPDQSALAAIAFSIRPGERVALVGPSGAGKSTVFQLLERFYDPQAGRILLDGIDIREA 431

Query: 440 SFDVIRDQIAVVLQQPILFNDTLRHNLTLGG-QFSDDVLWQALDIAQLQDVITKLDQGLE 498
               +R Q+A+V Q+  +F D++R N+ LG  + +D  + +A   A + + + +L QG +
Sbjct: 432 DPVAVRRQMALVPQEVAIFADSVRANIRLGRPEATDAEVEEAGRAALVDEFVARLPQGWD 491

Query: 499 SQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRT 558
           + +G  G+ LSGGQRQR+ IAR +L     ++LDEATSALD  +E  +  AL + + GRT
Sbjct: 492 TMVGERGVMLSGGQRQRIVIARAILRGAPILLLDEATSALDAESETLVQTALERSMEGRT 551

Query: 559 TLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTL 602
           TL++AHRLS V  AD I V+E G +   GTH EL+ + GLY  L
Sbjct: 552 TLVIAHRLSTVLSADRILVMEAGRIMDEGTHAELVAKGGLYARL 595