Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., lipid transporter ATP-binding/permease from Pseudomonas simiae WCS417

 Score =  221 bits (563), Expect = 7e-62
 Identities = 158/518 (30%), Positives = 264/518 (50%), Gaps = 22/518 (4%)

Query: 96  LMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGGINAHL 155
           L+++++     L + L +     VS  + +++R ++   L  +  R ++   SG + + +
Sbjct: 83  LLIILIAAWQGLGSFLGNYLLAKVSLGLVHDLRVQLFNNLLTLPNRYFDNHNSGHLISRI 142

Query: 156 ITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSRMLGSQ 215
             ++  +       +   +   +TVI     LL++ WRL L ++ + P++         +
Sbjct: 143 TFNVTMVTGAATDAIKVVIREGMTVIFLFASLLFMNWRLTLVMIAILPLIAVMVSTASKK 202

Query: 216 VKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADKYAWQS 275
            +   K+   A     +   ET+ G   +R+   E     R +    A + N +K    +
Sbjct: 203 FRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEVYEEKRFLK---ASQSNTNKQLRMT 259

Query: 276 EAAGRLSFLLFLLGFELFRAVAMLMVVF--SDLTIGQIFAVFGYLWFMLSPVQELLG--- 330
                 +  L L+ +    AV M +V++   D + G + A       +  P+++L     
Sbjct: 260 RTGAIYTPALQLVIYTAM-AVLMFLVLYLRGDASAGDMVAYITLAGLLPKPIRQLSEVSS 318

Query: 331 -IQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFSYDG-ESQVL 388
            IQ     A++  ++++  +E++       KV+     G +D+   N++F+Y G E  VL
Sbjct: 319 TIQKGVAGAESIFEQLDEEVEVDRGTIERDKVS-----GRLDVR--NLNFTYPGTERHVL 371

Query: 389 NDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIRDQI 448
            D+S     G+ +ALVG SG GKSTL  L+   Y  +SG I  +G   ++     +R  I
Sbjct: 372 KDISFTAEPGQMIALVGRSGSGKSTLASLIPRFYHHESGEILLDGIEIENYKLLNLRKHI 431

Query: 449 AVVLQQPILFNDTLRHNLTLG---GQFSDDVLWQALDIAQLQDVITKLDQGLESQIGRNG 505
           A V Q   LF+DT+ +N+  G   G    +V   A D A  +D I +L +G ++Q+G NG
Sbjct: 432 AQVTQHVTLFSDTVTNNIAYGDLAGAPRAEVEAAAAD-ANAKDFIDQLPKGFDTQVGENG 490

Query: 506 IRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTLIVAHR 565
           + LSGGQRQRLAIAR +L N   +ILDEATSALDT +E  +  AL K + GRTTL++AHR
Sbjct: 491 VLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMQGRTTLVIAHR 550

Query: 566 LSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           LS +++ADLI V++DG + + GTH ELL Q G Y  L+
Sbjct: 551 LSTIEKADLILVMDDGRIVERGTHGELLAQNGYYARLH 588