Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., Lipid A export permease/ATP-binding protein MsbA from Variovorax sp. SCN45

 Score =  215 bits (547), Expect = 5e-60
 Identities = 147/510 (28%), Positives = 251/510 (49%), Gaps = 9/510 (1%)

Query: 95  LLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGGINAH 154
           LL+  V  IA  +     SR    ++     ++RR M E+L    +  +  + +  ++  
Sbjct: 37  LLLFAVRGIAQFISQYALSR----IANEGMQKLRRVMFERLLGAELALFTRQSASALSNT 92

Query: 155 LITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSRMLGS 214
           ++ +++T    +   L        T+I     L++L W+L L +  + P + +  ++   
Sbjct: 93  VVYEVQTGAMLLVQALLGLSRDGFTLIALLGYLVYLNWKLTLIVAFLVPSISWIMKVFSK 152

Query: 215 QVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADKYAWQ 274
           ++  L ++  QA +     + E +     +R    E     R    +  +   A K    
Sbjct: 153 RLYRLTQQGQQATDELAYVVEENVLAHRVVRLHGAEGAQGRRFEQLSQRLNRLAVKSTIA 212

Query: 275 SEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQIFAVFGYLWFMLSPVQELLGIQFS 334
             A   L+ ++  L   +   +A+        T+G   A    +  +++P++ L  +   
Sbjct: 213 QAATTPLTQMMASLALSVVVMIALWQSGKQGFTVGGFVAYITAMLMLIAPIRRLAEVAGP 272

Query: 335 WYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFSY--DGESQVLNDLS 392
                AAL+R    L L +E  P S+     +  E  IE+ N+  SY  D E + L+ ++
Sbjct: 273 ITRGLAALERG---LVLIDEVAPESQGTFRIEHAEGRIELRNVQVSYRGDDEQRALDGVN 329

Query: 393 LHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIRDQIAVVL 452
           L I  G+ VA VG SG GK+TL+ LL    +  SG +  +G    +     +R Q A+V 
Sbjct: 330 LTIEPGQVVAFVGPSGSGKTTLVNLLPRFVQPSSGQVLLDGHDTSEWELKSLRAQFAMVS 389

Query: 453 QQPILFNDTLRHNLTLGGQFSDDVLWQALDIAQLQDVITKLDQGLESQIGRNGIRLSGGQ 512
           Q  ++ N+TL  N+ LG +   + + Q +D A L   +  L QG+++ +G N  +LSGGQ
Sbjct: 390 QDVVMLNETLAANVALGSEIDRERVLQCIDAANLSSHVENLPQGIDTVLGHNATQLSGGQ 449

Query: 513 RQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTLIVAHRLSAVKQA 572
           RQRLAIAR +  N   ++LDEATSALDT +E  +  AL + +  RTTLIVAHRLS ++ A
Sbjct: 450 RQRLAIARALYKNAPVLLLDEATSALDTESERLVQDALQRLMQNRTTLIVAHRLSTIQHA 509

Query: 573 DLIYVLEDGHVSQSGTHHELLEQEGLYQTL 602
           D I V+E G +++ G+H +L++ +GLY  L
Sbjct: 510 DRIIVMEQGRIAEQGSHEQLMQLDGLYARL 539