Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., RTX toxin transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  221 bits (564), Expect = 7e-62
 Identities = 172/603 (28%), Positives = 305/603 (50%), Gaps = 48/603 (7%)

Query: 23  SWLITQVKKHRAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQ 82
           SW I  + KHR  L    FI+ +  L ++  PL   +++D+VL++     ++V+      
Sbjct: 164 SWFIPSLVKHRKLLGEVLFISFILQLFALVSPLFFQVVMDKVLVHRGLTTLDVL------ 217

Query: 83  GWQTATGYIMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQ 142
                    ++ LL+VVV      LLN L+S  F+  +  I  E+  ++   L ++ +  
Sbjct: 218 ---------VIGLLVVVVFE---SLLNGLRSYVFSHTTNRIDVELGARLFRHLVQLPLAY 265

Query: 143 YETRGSGGINAHLITDIETIDQFI-GSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLV 201
           ++ R  G   A  + ++E I  F+ G+ L+  L  + +++  A++L +    + L ++++
Sbjct: 266 FQARRVGDSVAR-VRELENIRSFLTGNALTVLLDVVFSIVFVAVMLFY---SVPLTLIVL 321

Query: 202 NPIVIYFSRMLGSQVKHLKKRENQAFERF---QNRLVETLDGIYQLRAANKE----REFL 254
             + +YF   L + V  L+ R ++ F R    Q  LVET+  I  ++A   E    R + 
Sbjct: 322 ASMPLYFGLSL-AVVPILRSRLDEKFARGAENQAMLVETVSAIQTVKATALEPAFGRRWD 380

Query: 255 NRLISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAML----MVVFSDLTIGQ 310
           N+L +   A     +  +W +E          L+G +L  A  +     +V+ +DLT+GQ
Sbjct: 381 NQLAAYISASFRTQNLASWANEGVN-------LIG-KLVNAATLWYGAHLVMNNDLTVGQ 432

Query: 311 IFAVFGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEV 370
             A   +   +  P+  +  +   +     ++ R+  +L    E  P +        G V
Sbjct: 433 FVAFNMFAQRVSQPIMRMAQLWTDFQQTGISMARLGDILNTRTEVPPSTAAQLPALKGRV 492

Query: 371 DIEINNIHFSYDGESQ-VLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAI 429
            ++  N+ F Y  E+  VLN +SL +  G+ + +VG SG GKSTL +L+  +Y  + G +
Sbjct: 493 TLD--NLTFRYRPEAAPVLNGVSLDVRPGEVIGIVGRSGSGKSTLTKLIQRLYAPEQGRL 550

Query: 430 RFNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLGGQFSD-DVLWQALDIAQLQD 488
             +G     I    +R Q+ VVLQ+  LFN ++R N+ +    +  + +  A  +A   +
Sbjct: 551 LVDGIDISLIDAAQLRMQVGVVLQENTLFNRSVRENIAIVDPAAPLEAIIHAAQLAGAHE 610

Query: 489 VITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHL 548
            I++L +G ++ +G  G  LSGGQRQR+AIAR + ++P+ +I DEATSALD  +EA +  
Sbjct: 611 FISELPEGYDTMVGEQGASLSGGQRQRIAIARALFTHPRVLIFDEATSALDYESEAIVQR 670

Query: 549 ALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQ-EGLYQTLYGSVQ 607
            ++    GRT  I+AHRLSAV+ A+ I V++ G + + GTH  LL + +G+Y  L+    
Sbjct: 671 NMAHICRGRTVFIIAHRLSAVRHANRIIVMDKGKIVEGGTHESLLARPKGIYAHLWNMQG 730

Query: 608 SQH 610
             H
Sbjct: 731 GGH 733