Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  242 bits (618), Expect = 3e-68
 Identities = 158/539 (29%), Positives = 277/539 (51%), Gaps = 15/539 (2%)

Query: 73  VEVMNQFLPQGWQTA-TGYIMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKM 131
           + ++   L +G+  A + ++ +   M++ +     L     S   + VS  +  +MRR++
Sbjct: 45  ISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRL 104

Query: 132 IEKLGRISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISLL----TVIGTAIVL 187
                 + +R ++   +GG+ + +  D E   Q  G+T S+ L+S++    ++IG   ++
Sbjct: 105 FNHFMHMPVRFFDQESTGGLLSRITYDSE---QVAGAT-SRALVSIVREGASIIGLLTLM 160

Query: 188 LWLEWRLGLFILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAA 247
            W  W+L L +++V P+V +    +  + + + +    A     +   + L G   + + 
Sbjct: 161 FWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSY 220

Query: 248 NKEREFLNRLISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLT 307
             +     R    ++++R+   K       A  +  ++  L       +A +  + ++LT
Sbjct: 221 GGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELT 280

Query: 308 IGQIFAVFGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQL 367
            G    VF  ++ ++ P++ L  +   +    AA + +  L++LE E R   K       
Sbjct: 281 PGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETE-RDNGKYEAERVN 339

Query: 368 GEVDIEINNIHFSYDG-ESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQS 426
           GEVD++  ++ F+Y G E   L+ +S  IP GK VALVG SG GKST+  L    Y   S
Sbjct: 340 GEVDVK--DVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDS 397

Query: 427 GAIRFNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLG--GQFSDDVLWQALDIA 484
           G+I  +G    D     +R   A+V Q   LFNDT+ +N+     G+++ + + QA   A
Sbjct: 398 GSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQA 457

Query: 485 QLQDVITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEA 544
              + I  + QGL++ IG NG  LSGGQRQR+AIAR +L +   +ILDEATSALDT +E 
Sbjct: 458 HAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESER 517

Query: 545 ALHLALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           A+  AL +    +T L++AHRLS ++QAD I V+++G + + G H +LL Q+G Y  L+
Sbjct: 518 AIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLH 576