Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., Lipid A export ATP-binding/permease protein MsbA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  211 bits (538), Expect = 5e-59
 Identities = 154/488 (31%), Positives = 240/488 (49%), Gaps = 11/488 (2%)

Query: 127 MRRKMIEKLGRISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIV 186
           +RR M  KL    +  +  + +  ++  L+ +++T  Q + +         L VI     
Sbjct: 105 LRRAMFVKLNDAQMTLFARQNASRLSNTLVYEVQTGSQLLVTAFLTLTKDSLAVIALMGY 164

Query: 187 LLWLEWRLGLFILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRA 246
           LL+L W+L L +LL+ P +I   R+L  +   L +   QA +     + E +     +R 
Sbjct: 165 LLYLNWKLTLIVLLIFPGLILIMRVLSRRFYKLTRDSQQATDELAYVVEENVLAHRMVRL 224

Query: 247 ANKEREFLNRLISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDL 306
              +     R    + A+R  A K    S A   L+ LL         AVA+     S +
Sbjct: 225 HGAQARQSQRFDRLSMALRRLALKSTVSSAAMTPLTQLLASAALSAVIAVALWQSSTSGV 284

Query: 307 TIGQIFAVFGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEY----RPISKVN 362
           T+G   A    +  +++P++ L  I        AAL+R   L+E   E         +V+
Sbjct: 285 TVGNFVAFVTAMLMLITPIRHLAEIAAPIARGLAALERGLELIEHTPEQSGGSHTADRVS 344

Query: 363 PFTQLGEVDIEI---NNIHFSYDGESQV-LNDLSLHIPAGKKVALVGASGGGKSTLIQLL 418
               L +V +     +      D +S + L  +SL I  G+ VA VG SG GK+TL+ LL
Sbjct: 345 GSISLRDVWVRYPAKDGGPAREDDDSLIALRGVSLDIRPGEVVAFVGPSGSGKTTLVNLL 404

Query: 419 IGVYRAQSGAIRFNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLGG---QFSDD 475
                 + G +  +G    +     +R Q A+V Q  ++ NDTL  N+ LG    Q  + 
Sbjct: 405 PRFVEVERGEVWLDGVPLTEWELRSLRRQYAMVSQDVVMLNDTLAANVALGAADDQIDEM 464

Query: 476 VLWQALDIAQLQDVITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEAT 535
            +  AL  A L ++I +L QG+ S +G N   LSGGQRQRLAIAR +  +   +ILDEAT
Sbjct: 465 RVRAALVSANLGELIQRLPQGIHSTVGHNAAELSGGQRQRLAIARAIYKDAPVLILDEAT 524

Query: 536 SALDTATEAALHLALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQ 595
           SALD  +E  +  AL++ + GRTTL++AHRLS ++ AD + VL DG + + G+H ELL+ 
Sbjct: 525 SALDNESERLVQDALARLMKGRTTLVIAHRLSTIEHADRVIVLADGRIREQGSHRELLQA 584

Query: 596 EGLYQTLY 603
           +GLY  L+
Sbjct: 585 DGLYARLH 592