Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., putative multidrug transporter membrane ATP-binding components from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  221 bits (563), Expect = 7e-62
 Identities = 167/580 (28%), Positives = 282/580 (48%), Gaps = 38/580 (6%)

Query: 33  RAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQGWQT--ATGY 90
           R  L  A  +  +A    V  PLL+   +D ++  H           LP G     A  Y
Sbjct: 22  RKPLSVAVMMLWIAAAAEVSGPLLISYFIDNMVARH----------HLPLGKVAGLAAAY 71

Query: 91  IMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGG 150
           + L  L           L+  QS  F   +  +   +R  +++   R  +  ++T+  G 
Sbjct: 72  VGLQFLAAG--------LHYAQSLLFNRAAVGVVQSLRTDVMDAALRQPLSAFDTQPVGQ 123

Query: 151 INAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSR 210
           + + +  D E I     + ++  L S   +    + +  L+WR+ L  +L+ P V+    
Sbjct: 124 LISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAILIFPAVLTVMI 183

Query: 211 MLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADK 270
           +       + +R         +   E ++G+  ++   ++  F  R+    +A R +   
Sbjct: 184 IYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERM---GEASRSH--- 237

Query: 271 YAWQSEAAGRLSFLLFLLGFELFRAVAM--LMVVFS-----DLTIGQIFAVFGYLWFMLS 323
           Y  + +      FLL  L   LF A+ +  L+++FS      + +G ++A   YL  +  
Sbjct: 238 YMARMQTLRLDGFLLRPL-LSLFSALILCGLLMLFSFTSAGTIEVGVLYAFISYLSRLNE 296

Query: 324 PVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFSYDG 383
           P+ EL   Q     A  A +R+  L++   + R  S   P  Q G +DI+  ++ F+Y  
Sbjct: 297 PLIELTTQQSMLQQAVVAGERVFELMDRPRQ-RYGSDDRPL-QSGAIDID--HLSFAYRD 352

Query: 384 ESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISFDV 443
           ++ VL D++L +P+   VALVG +G GKSTL  LL+G Y    G IR +G+    ++  V
Sbjct: 353 DNLVLQDITLSVPSRSFVALVGHTGSGKSTLASLLMGYYPLTQGEIRLDGREIASLNHRV 412

Query: 444 IRDQIAVVLQQPILFNDTLRHNLTLGGQFSDDVLWQALDIAQLQDVITKLDQGLESQIGR 503
           +R  +A+V Q P++  DT   N+TLG   S+  +WQAL+  QL D+   L  GL + +G 
Sbjct: 413 LRQGVAMVQQDPVVMADTFLANVTLGRDVSEAQVWQALETVQLADLARGLSDGLHTHLGE 472

Query: 504 NGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTLIVA 563
            G  LS GQ+Q LA+AR+++  P+ +ILDEAT+++D+ TE A+  AL+      T +++A
Sbjct: 473 QGNTLSVGQKQLLALARVLVDAPQILILDEATASIDSGTEQAIQQALAAIRERTTLVVIA 532

Query: 564 HRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           HRLS + +AD I VL  G   + GTH +LL  +G Y  +Y
Sbjct: 533 HRLSTIVEADTILVLHRGQAVERGTHQQLLAAQGRYWQMY 572