Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  219 bits (559), Expect = 2e-61
 Identities = 160/583 (27%), Positives = 275/583 (47%), Gaps = 44/583 (7%)

Query: 33  RAKLLFANFIAVVATLISVPIPLLMPLMVDEVLL--NHPAKGVEVMNQFLPQGWQTATGY 90
           R  L  A  +  VA    V  PLL+   +D ++   N P K V  +          A  Y
Sbjct: 22  RKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLPLKVVAGL----------AAAY 71

Query: 91  IMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGG 150
           + L L            L+  QS  F   +  +  ++R  +++   R  + +++T+  G 
Sbjct: 72  VGLQLFAAG--------LHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQPVGQ 123

Query: 151 INAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSR 210
           + + +  D E I     + ++  L S   V    + +  L+WR+ L  +++ P+V+    
Sbjct: 124 VISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLVVMV 183

Query: 211 MLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADK 270
           +       + +R         +   E ++G+  ++   ++  F  R+    +A R +   
Sbjct: 184 IYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERM---GEASRSHYMA 240

Query: 271 YAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFS---DLTIGQIFAVFGYLWFMLSPVQE 327
                   G L   L  L   L     +++  FS    + +G ++A   YL  +  P+ E
Sbjct: 241 RMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIE 300

Query: 328 LLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVD-------IEINNIHFS 380
           L   Q     A  A +R+  L++            P  Q G  D       IE++N+ F+
Sbjct: 301 LTTQQAMLQQAVVAGERVFELMD-----------GPRQQYGNDDRPLQSGTIEVDNVSFA 349

Query: 381 YDGESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDIS 440
           Y  ++ VL +++L +P+   VALVG +G GKSTL  LL+G Y    G IR +G+    +S
Sbjct: 350 YRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLS 409

Query: 441 FDVIRDQIAVVLQQPILFNDTLRHNLTLGGQFSDDVLWQALDIAQLQDVITKLDQGLESQ 500
              +R  +A+V Q P++  DT   N+TLG   S++ +WQAL+  QL ++   +  G+ + 
Sbjct: 410 HSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQALETVQLAELARSMSDGIYTP 469

Query: 501 IGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTL 560
           +G  G  LS GQ+Q LA+AR+++  P+ +ILDEAT+++D+ TE A+  AL+      T +
Sbjct: 470 LGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLV 529

Query: 561 IVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           ++AHRLS +  AD I VL  G   + GTH +LL  +G Y  +Y
Sbjct: 530 VIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQGRYWQMY 572