Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A export permease/ATP-binding protein MsbA from Kangiella aquimarina DSM 16071

 Score =  235 bits (599), Expect = 4e-66
 Identities = 154/535 (28%), Positives = 261/535 (48%), Gaps = 7/535 (1%)

Query: 73  VEVMNQFLPQGWQTATGYIML--TLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRK 130
           V  +   +  G +    Y +L  T L ++   +   + N +       V + +   +R +
Sbjct: 45  VNSIKYLIDDGIKARDSYFLLVKTPLFIMGAIMLRGVFNFVSVYCMGWVGRKVVQTLREQ 104

Query: 131 MIEKLGRISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWL 190
           + E   R     +  R  G + + L  + E +       ++  L +  T+I     +   
Sbjct: 105 LYEHFVRQPTEFFSKRAPGNLLSTLTFNTEQVAVASSDAITSALRAGGTIIFIITFMALT 164

Query: 191 EWRLGLFILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKE 250
            WRL LF+ ++ P+V +  ++   ++K +                E++     ++     
Sbjct: 165 SWRLTLFLFILVPVVGWVIKVSARRLKKVSSSIQNVVGDVTRAAEESIKANQVIKIFGGT 224

Query: 251 REFLNRLISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQ 310
              +      A+  R+   K       A  +   +  +GF          ++   ++ G+
Sbjct: 225 EREIKNFNKQANRNRQQDMKLIATKGLASPVIQFIAGIGFAAIMYFGSQEMLNDRISEGE 284

Query: 311 IFAVFGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEV 370
           + +    +  +L P++E+  +        A  + +  +L+L  E  P    N   +  E 
Sbjct: 285 LISFITLMAMILRPLKEVSNVNTHLQRGIAGAQSVFDILDLPNE--PDEGTNVIDK-AEG 341

Query: 371 DIEINNIHFSYDGESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIR 430
            IE  ++ F Y  + +VLND+S ++PAG+ +ALVG SG GKST+  LL  +Y    G + 
Sbjct: 342 SIEFKHVSFGYKPDEKVLNDISFNVPAGQSIALVGKSGSGKSTIASLLQRLYNINQGDLL 401

Query: 431 FNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLG--GQFSDDVLWQALDIAQLQD 488
            +G    D++ D +R QIA V Q  +LFNDT+RHN+  G   + SD+ +  A   A   +
Sbjct: 402 IDGIPIQDLTLDSLRKQIATVSQSVVLFNDTIRHNIAYGRMDEVSDEDIISAAKNAHAWE 461

Query: 489 VITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHL 548
            I KL QGL++ +G NG+ LSGGQRQR+AIAR +L +   +ILDEATSALDT +E  +  
Sbjct: 462 FIEKLPQGLDTIVGDNGVMLSGGQRQRIAIARAMLKDAPILILDEATSALDTESERHIQE 521

Query: 549 ALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           AL + +  RTT++VAHRLS ++ AD I VL+DG + +SG+H ELL++ G Y  LY
Sbjct: 522 ALEELMKDRTTVVVAHRLSTIENADRILVLKDGVIIESGSHQELLDKNGEYTRLY 576