Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., ABC-type multidrug transport system, ATPase and permease components from Enterobacter asburiae PDN3

 Score =  219 bits (559), Expect = 2e-61
 Identities = 157/578 (27%), Positives = 279/578 (48%), Gaps = 34/578 (5%)

Query: 33  RAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQGWQTATGYIM 92
           R  L  A  +  +A +  V  PLL+   +D +          V   +LP G     G   
Sbjct: 22  RKPLSVAVLLLWIAAIAEVSGPLLISYFIDNM----------VAKSYLPLGLVAGLG--- 68

Query: 93  LTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGGIN 152
              +  V +++ +  L+  QS  F   +  +  ++R  +++   R  + +++ +  G + 
Sbjct: 69  ---VAYVGLQLTAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDIQPVGQVI 125

Query: 153 AHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSRML 212
           + +  D E I     + ++  L S   +    + +  L+WR+ L  + + P V+    + 
Sbjct: 126 SRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAITIFPAVLIVMVIY 185

Query: 213 GSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADKYA 272
                 + +R         +   E ++G+  ++   ++  F  R+    +A R +   Y 
Sbjct: 186 QRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERM---GEASRSH---YM 239

Query: 273 WQSEAAGRLSFLLFLLGFELFRAVAM--LMVVFS-----DLTIGQIFAVFGYLWFMLSPV 325
            + +      FLL  L   LF A+ +  L+++F       + +G ++A   YL  +  P+
Sbjct: 240 ARMQTLRLDGFLLRPL-LSLFSALVLCGLLMLFGLSSNGTIEVGVLYAFISYLGRLNEPL 298

Query: 326 QELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFSYDGES 385
            EL   Q     A  A +R+  L++   +    +  N    L    I  +N+ F+Y  + 
Sbjct: 299 IELTTQQSMLQQAVVAGERVFELMDRPRQ----AYGNDERPLQSGTIAFDNVSFAYREDR 354

Query: 386 QVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIR 445
            VL D++L +P+   VALVG +G GKSTL  LL+G Y    G IR +G+    +S  V+R
Sbjct: 355 LVLQDITLDVPSRGFVALVGHTGSGKSTLASLLMGYYPVTHGEIRLDGRPLASLSHTVLR 414

Query: 446 DQIAVVLQQPILFNDTLRHNLTLGGQFSDDVLWQALDIAQLQDVITKLDQGLESQIGRNG 505
             +A+V Q P++  DT   N+TLG  +S + +W  L+  QL ++      G+ +++G  G
Sbjct: 415 KGVAMVQQDPVVLADTFYANVTLGRDYSQEQVWDVLEKVQLAELARGFSDGINTKLGEQG 474

Query: 506 IRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTLIVAHR 565
             LS GQ+Q LA+AR+++  P+ +ILDEAT+++D+ TE A+  AL+      T +++AHR
Sbjct: 475 NNLSVGQKQLLALARVLIETPQILILDEATASIDSGTEQAIQQALAAVRDHTTLVVIAHR 534

Query: 566 LSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           LS + +AD I VL  G   + GTH ELLE +G Y  +Y
Sbjct: 535 LSTIVEADTILVLHRGQAVERGTHRELLEAKGRYWQMY 572