Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., lipid A export permease/ATP-binding protein MsbA from Enterobacter asburiae PDN3

 Score =  249 bits (635), Expect = 3e-70
 Identities = 157/535 (29%), Positives = 274/535 (51%), Gaps = 7/535 (1%)

Query: 73  VEVMNQFLPQGWQTATGYIMLTLLMVVV-MRIASQLLNILQSRQFTLVSKTITYEMRRKM 131
           + ++   L  G+      ++L + +VV+ + I   + + + S   + VS  +   MRR++
Sbjct: 45  LSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRL 104

Query: 132 IEKLGRISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLE 191
              +  + +  ++ + +G + + +  D E +     S L   +    ++IG   ++ +  
Sbjct: 105 FSHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFAMMFYYS 164

Query: 192 WRLGLFILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKER 251
           W+L + ++++ PIV    R++  + +++ K       +      + L G  ++     + 
Sbjct: 165 WQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQD 224

Query: 252 EFLNRLISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQI 311
               R    ++ +R    K    S  +  +  L+  L        A    V   LT G I
Sbjct: 225 VETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTI 284

Query: 312 FAVFGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVD 371
             VF  +  ++ P++ L  +   +    AA + + S+L+ E+E     +V    +    D
Sbjct: 285 TVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDSEQEKDEGKRV---IERANGD 341

Query: 372 IEINNIHFSYDG-ESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIR 430
           +E  N+ F+Y G E   L +++L IPAGK VALVG SG GKST+  L+   Y    G I 
Sbjct: 342 VEFRNVTFTYPGREVPALRNINLSIPAGKTVALVGRSGSGKSTIASLMTRFYDINEGEIL 401

Query: 431 FNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLG--GQFSDDVLWQALDIAQLQD 488
            +G    + +   +R+Q+A+V Q   LFNDT+ +N+      ++S + +  A  +A   D
Sbjct: 402 LDGHDLREYTLQSLRNQVALVSQNVHLFNDTVANNIAYARTDEYSREQIENAARMAYAMD 461

Query: 489 VITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHL 548
            I K+D GL++ IG NG+ LSGGQRQR+AIAR +L +   +ILDEATSALDT +E A+  
Sbjct: 462 FINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQS 521

Query: 549 ALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           AL +    RT+L++AHRLS ++QAD I V+EDG + + G+H +LLE  G+Y  L+
Sbjct: 522 ALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGVIVERGSHADLLEHRGVYAQLH 576