Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., SmdB family multidrug efflux ABC transporter permease/ATP-binding protein from Dickeya dianthicola ME23

 Score =  218 bits (555), Expect = 6e-61
 Identities = 151/513 (29%), Positives = 258/513 (50%), Gaps = 20/513 (3%)

Query: 99  VVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGGINAHLITD 158
           VV++  + LL+ +Q+  F  V+  +  ++R  +++   R  +  ++T+  G + + +  D
Sbjct: 72  VVLQGIAALLHYVQALMFNRVAVGVVQQLRIDVMDAALRQPLAVFDTQPVGQLISRVTND 131

Query: 159 IETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSRMLGSQVKH 218
            E +       +   L S   +    I +  L+WR+ L  L + P V     +       
Sbjct: 132 TEVVRDLYVMVVGSVLRSAALIGAMLIAMFTLDWRMALVTLTIFPAVAIVMVIYQRYSTP 191

Query: 219 LKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADKYAWQSEAA 278
           + +R         +   E++ G+  ++   ++  F  +L   ++A R +   Y  + +  
Sbjct: 192 IVRRMRSYLADINDGFNESISGMSVIQQFRQQVRFGKKL---SEASRAH---YETRMQTL 245

Query: 279 GRLSFLLFLLGFELFRAVAM--LMVVFSDLTIGQI-----FAVFGYLWFMLSPVQELLGI 331
               FLL  L   LF A+ M  L++ F   ++G +     +A   YL  +  P+ EL   
Sbjct: 246 RLDGFLLRPL-LSLFSALVMCGLLLQFGFSSVGSVGVGILYAFINYLGRLNEPLIELTTQ 304

Query: 332 QFSWYAAKAALKRINSLLE-LEEEYRPISKVNPFTQLGEVDIEINNIHFSYDGESQVLND 390
           Q     A  A +RI  L++   + Y      +    L    I+I  + FSY     VL+D
Sbjct: 305 QSMLQQAVVAGERIFELMDGARQRYG-----DDVRALESGRIDIGQVTFSYHKGKPVLHD 359

Query: 391 LSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIRDQIAV 450
           + LH+P    VALVG +G GKSTL  LL+G Y    G IR + +    +S  V+R  +A+
Sbjct: 360 IELHVPDRGFVALVGHTGSGKSTLASLLMGYYVPDRGEIRLDDRPLSSLSHQVLRQHVAM 419

Query: 451 VLQQPILFNDTLRHNLTLGGQFSDDVLWQALDIAQLQDVITKLDQGLESQIGRNGIRLSG 510
           V Q P++  D++  N+TLG   S++ +WQ LD  QL  ++  + +GL +++G  G  LS 
Sbjct: 420 VQQDPVVLADSMYANVTLGRDISEENVWQVLDAVQLAPLVRAMPEGLHTRVGEQGNNLSV 479

Query: 511 GQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTLIVAHRLSAVK 570
           GQ+Q LA+AR++++ P+ +ILDEAT+ +D+ TE A+  AL       T +++AHRLS + 
Sbjct: 480 GQKQLLALARVLVAAPRILILDEATANIDSGTEQAIQRALRLVRSHTTLVVIAHRLSTIV 539

Query: 571 QADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           +AD I VL  G   + GTH +LL +EG Y  +Y
Sbjct: 540 EADNILVLHHGKTVEQGTHEQLLTREGRYYQMY 572