Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Dickeya dadantii 3937

 Score =  264 bits (674), Expect = 9e-75
 Identities = 160/535 (29%), Positives = 282/535 (52%), Gaps = 7/535 (1%)

Query: 73  VEVMNQFLPQGWQTATGYIMLTL-LMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKM 131
           + ++   L  G+  A   +++ + L ++ + I   + + + S     VS  +   MRR++
Sbjct: 45  LSLLKPLLDDGFGKADRSVLVWMPLAIIGLMIMRGISSYISSYCVAWVSGKVVMNMRRRL 104

Query: 132 IEKLGRISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLE 191
              +  + +  ++ + +G + + +  D E +     + L   +    ++IG  +++ W  
Sbjct: 105 FSHIMGMPVSFFDQQSTGTLLSRITYDSEQVAASSSNALVTVVREGASIIGLFVLMFWYS 164

Query: 192 WRLGLFILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKER 251
           W+L L ++L+ PIV Y  R++  + + + K       +      + L G  ++     + 
Sbjct: 165 WQLSLILVLIAPIVSYSMRVVSKRFRSISKSMQNTMGQVTTSAEQMLKGHKEVLIFGGQT 224

Query: 252 EFLNRLISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQI 311
             + R  S ++ +R+   K    S  +  +  L+  L        A    V   LT G I
Sbjct: 225 VEVERFDSVSNRMRQQGMKMVSASSISDPVVQLIASLALAFVLYAASFPSVMETLTAGTI 284

Query: 312 FAVFGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVD 371
             VF  ++ ++ P++ L  +   +    AA + + ++L++E+E    ++V    +  + D
Sbjct: 285 TVVFSSMFTLMRPLKSLTNVNAQFQRGMAACQTLFTILDMEQEKDTGTRV---LEHAKGD 341

Query: 372 IEINNIHFSYDG-ESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIR 430
           I   +++F+Y G E+  L ++SLHIP GK VALVG SG GKST+  L+   Y  QSG I 
Sbjct: 342 IAFRDVNFAYPGKETLALKNISLHIPPGKTVALVGRSGSGKSTIANLITRFYDIQSGEIL 401

Query: 431 FNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTL--GGQFSDDVLWQALDIAQLQD 488
            +G    D +   +R Q+A+V Q   LFNDT+ +N+    G ++S + + +A  +A   D
Sbjct: 402 LDGHDLRDYTLPSLRSQVALVSQNVHLFNDTIANNIAYACGDRYSREDIERAAKMAHAMD 461

Query: 489 VITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHL 548
            I +L+ GL++ IG NG+ LSGGQRQR+AIAR +L +   ++LDEATSALDT +E A+  
Sbjct: 462 FIGRLEHGLDTVIGENGVLLSGGQRQRIAIARALLRDCPILVLDEATSALDTESERAIQA 521

Query: 549 ALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           AL +    RT L++AHRLS +++AD I V+EDG + + G H ELL + G Y  L+
Sbjct: 522 ALDELQKNRTALVIAHRLSTIEKADEILVVEDGQIIERGQHSELLARNGAYAQLH 576