Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA from Alteromonas macleodii MIT1002

 Score =  228 bits (582), Expect = 4e-64
 Identities = 156/526 (29%), Positives = 261/526 (49%), Gaps = 24/526 (4%)

Query: 90  YIMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSG 149
           Y+ L    +V + +   + N L S   + +   +   MR+++ EK   + +  ++    G
Sbjct: 61  YLRLAAYAIVPLFLLRGVFNFLGSYTLSWIGAQVVMRMRQQLFEKYIHLPVAFHDNHAVG 120

Query: 150 GINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFS 209
           G+ + +  D E +    G  L   +     VIG   V+ +  W+L L  LL+ PIV    
Sbjct: 121 GLISKVTYDTEQVANASGKALLTLVREGALVIGLLCVMFYYSWQLSLIFLLIGPIVAVIV 180

Query: 210 RMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENAD 269
            ++  + + + K   Q+     + + + + G   +     +     R         E  +
Sbjct: 181 SVVSKRFRVVSKNIQQSMGNLTSSVEQAVKGHKVVIMFGGQEIEQKRF--------EQKN 232

Query: 270 KYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVF--------SDLTIGQIFAVFGYLWFM 321
            +  Q      ++ +L +   ++  ++A+ +V+F          LT G    V   +  +
Sbjct: 233 NHNRQQSMKLNVTSILSVSSIQVIASIALAVVLFIASTPGMLEKLTAGVFINVVFCMVML 292

Query: 322 LSPVQELLGIQFSWYAAKAALKRINSLL-ELEEEYRPISKVNPFTQLGEVDIEINNIHFS 380
           L P+++L  I   +    AA   I  +L E +EE +  +KV   T      IE +++ FS
Sbjct: 293 LKPLKQLTTINNQFQKGMAACASIFEILDEADEEDKGKTKVERATG----KIEFDDVTFS 348

Query: 381 YDG-ESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDI 439
           Y G ++  L+++S     G+ +ALVG SG GKST+  LL   Y  Q G IR +    +DI
Sbjct: 349 YPGKQTPALSNVSFIANPGQSIALVGRSGSGKSTISSLLTRFYVPQEGEIRLDDTALNDI 408

Query: 440 SFDVIRDQIAVVLQQPILFNDTLRHNLTLGGQ--FSDDVLWQALDIAQLQDVITKLDQGL 497
               +R Q AVV Q   LFNDT+ +N+  G +   S   +  A  +A +++ ++ L +GL
Sbjct: 409 DLKDLRAQFAVVSQNVTLFNDTIANNIAYGARQNVSRKDIENAAKMAHVEEFLSNLPEGL 468

Query: 498 ESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGR 557
           ++ IG NG+ LSGGQRQR+AIAR +L+    +ILDEATSALDT +E  +  AL       
Sbjct: 469 DTVIGENGLMLSGGQRQRIAIARAILAEAPILILDEATSALDTESERLIQDALETLQKRC 528

Query: 558 TTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           T+++VAHRLS ++ AD I V+E G + + G H+ELLE+ G Y  L+
Sbjct: 529 TSIVVAHRLSTIENADCIMVVEQGRIIEKGKHNELLEKGGHYAQLH 574