Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  229 bits (584), Expect = 3e-64
 Identities = 175/584 (29%), Positives = 283/584 (48%), Gaps = 35/584 (5%)

Query: 33  RAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQGWQTATGYIM 92
           + ++++A    +VA L+ + +P       D   LN       ++  FL         Y +
Sbjct: 35  KMRVIWATVFLIVAKLVLIAVPYFFKWATDA--LNGKLDMAGLVPAFLLGAVALVIAYNL 92

Query: 93  LTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGGIN 152
             L+ V         LN L+   F  V +    ++  +    + R+S+R +  R +GG++
Sbjct: 93  TRLIQVG--------LNQLRDSLFASVGQHAVRQLAYRTFVHMHRLSLRFHLERKTGGLS 144

Query: 153 AHL---ITDIETIDQF-IGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPI--VI 206
             +      IETI +F I +T   F+  LLT I     + W  +     ++ V  +   I
Sbjct: 145 RVIERGTKGIETIVRFTILNTAPTFIEFLLTAI-----IFWASYGFSYVLVTVVTVWAYI 199

Query: 207 YFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRE 266
           +F+    +    +++  N +      + +++L     ++    E     R     D   E
Sbjct: 200 WFTVRASNWRIGIRRAMNDSDTDANTKAIDSLLNFETVKYFGNEEMEARRF----DVAME 255

Query: 267 NADKYA---WQSEAAGRLSF---LLFLLGFELFRAVAMLMVVFSDLTIGQIFAVFGYLWF 320
             +K A   W S   G L+F   ++F +G  +   ++ L V   + TIG    V   L  
Sbjct: 256 RYEKSAISIWTS--LGWLNFGQGVIFGIGSTIMMVMSALAVQRGEQTIGDFVFVNALLLQ 313

Query: 321 MLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFS 380
           +  P+  +  +          ++++  LLE+E E        P    G   I   ++HF+
Sbjct: 314 LSVPLNFIGFVYREIRQGLTDIEQMFDLLEVEAEVTDRPDAKPLAA-GPGAISFRDVHFA 372

Query: 381 YDGESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDIS 440
           YD E  +L  +S  +PAGK VA+VG SG GKST+ +LL   Y  Q GA+  +GQ   D++
Sbjct: 373 YDPERPILKGVSFDVPAGKTVAIVGPSGAGKSTISRLLYRFYDIQEGAVTIDGQDIRDVT 432

Query: 441 FDVIRDQIAVVLQQPILFNDTLRHNLTLGG-QFSDDVLWQALDIAQLQDVITKLDQGLES 499
              +R  I +V Q  +LFNDTL +N+  G    +D+ L  A D AQ+   I KL  G  +
Sbjct: 433 QKSLRSMIGMVPQDTVLFNDTLAYNIRYGRPSATDEELKAAADAAQISAFIGKLPDGYAT 492

Query: 500 QIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTT 559
            +G  G++LSGG++QR+AIAR +L  P  +ILDEATSALDT TE  +  AL      RTT
Sbjct: 493 MVGERGLKLSGGEKQRVAIARTILKAPPILILDEATSALDTHTEQEIQSALDIVSKNRTT 552

Query: 560 LIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLY 603
           L++AHRLS V  AD I VL++G +++ GTH  L+  +GLY +++
Sbjct: 553 LVIAHRLSTVIHADEIIVLKEGLIAERGTHASLMAHDGLYASMW 596