Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., Lipid A export ATP-binding/permease protein MsbA from Acinetobacter radioresistens SK82

 Score =  228 bits (580), Expect = 7e-64
 Identities = 144/493 (29%), Positives = 244/493 (49%), Gaps = 16/493 (3%)

Query: 118 LVSKTITYEMRRKMIEKLGRISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISL 177
           ++S+++ +++R+++  KL R+  + Y    SG I A ++ ++E +      +L   +   
Sbjct: 85  VISRSLIFQIRQEVFAKLLRLPAQYYLDNNSGQITAKIMYNVEQLTAASSESLKTLVQYG 144

Query: 178 LTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVET 237
              +G    LL+  WRL + IL+  P++    R    +++ L  +         + + E+
Sbjct: 145 FITLGLIGYLLYTNWRLTICILIFAPLIGLLIRKAAKRMRKLSVQVQNTMGDINHVVQES 204

Query: 238 LDGIYQLRAANKEREFLNRLISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVA 297
           ++G   ++    E     R    ++   +   K     +    +  L+  +   +   +A
Sbjct: 205 VNGNAVVKGFGGETFEQERFYHHSNENLKRGLKMVIVQQMNSPIVQLIMAIAMSIIIWIA 264

Query: 298 MLMVVFSDLTIGQIFAVFGYLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEE--- 354
           +   V  + + G+  A       +  P++ L  I        AA   +  LL++ EE   
Sbjct: 265 LRPQVLGNTSAGEFVAYITAAGLLAKPIKSLTDINEKLQRGMAAAYSVFELLDMPEEKNT 324

Query: 355 --YRPISKVNPFTQLGEVDIEINNIHFSYDGESQVLNDLSLHIPAGKKVALVGASGGGKS 412
              +P+ K N         IE N ++ +Y   SQ + D SL++ AG+ VALVG SG GKS
Sbjct: 325 GDLKPVLKGN---------IEFNQVNLTYSDGSQAIYDFSLNVKAGETVALVGRSGAGKS 375

Query: 413 TLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLGGQ- 471
           +L+ LL+      SG I  +G     I    +R QIA+V QQ +LFN ++R N+  G   
Sbjct: 376 SLVNLLVRFQEISSGKILLDGFDIQKIELTALRSQIAMVNQQVVLFNRSVRDNIAYGQLQ 435

Query: 472 -FSDDVLWQALDIAQLQDVITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVI 530
             S+  +  A   A   D I  L QG ++ +G  G+ LSGGQRQR+AIAR +L N   +I
Sbjct: 436 GASEAEIIAAAKAAYAHDFIMSLPQGYDTILGAQGLNLSGGQRQRIAIARAILKNAPILI 495

Query: 531 LDEATSALDTATEAALHLALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHH 590
           LDEATSALD  +E  +  A  K +  RTT+++AHRLS ++ AD I V++ G + + G H 
Sbjct: 496 LDEATSALDNESEHFIQKAFDKAMQERTTIVIAHRLSTIENADRIVVMDKGRIVEQGNHQ 555

Query: 591 ELLEQEGLYQTLY 603
           EL+++ G Y  L+
Sbjct: 556 ELMQKHGAYYQLH 568