Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., S41 family peptidase from Magnetospirillum magneticum AMB-1

 Score =  132 bits (331), Expect = 4e-35
 Identities = 108/361 (29%), Positives = 168/361 (46%), Gaps = 40/361 (11%)

Query: 209 EDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQMTDDYTIIRSLVAG 268
           ED+ +  +N     +DPH+SYL+P+N++    +      G+G  + M + +  + S +  
Sbjct: 56  EDLIEAALNGMLASLDPHSSYLNPKNSKDMDIQTRGEFGGLGLEVTMENGWVKVVSPIDD 115

Query: 269 GPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLPEGKDAK 328
            PA  +  +  GD I  +  E      V G  L + V  ++G   + +KL V   G +  
Sbjct: 116 TPAYRAG-MQPGDFITHLDGE-----QVQGLSLSEAVDRMRGTVNTDIKLTVRRGGVEQP 169

Query: 329 SHVVTIVRDKIRLEDRAVKSEVIE-KAGKKIGVLEVPSFYVGLAQDTEKLLAELK---AK 384
                     I+L    +K + ++ +    IG + +  F      D  +++ +LK    K
Sbjct: 170 FD--------IKLTRAVIKVQTVKGQLHGDIGYIRISQFSATTHADLVRIMTQLKKDIGK 221

Query: 385 KVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVR----DSYGRVNVNSDTDGSISYS 440
              G ++DLRNN GG L +A A+S  F+  G +V  R    +   R N      G I+  
Sbjct: 222 TPTGFVIDLRNNPGGLLDQAVAVSDDFLDKGEIVSTRSRRPEDTQRFNARP---GDIADG 278

Query: 441 GPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYDLFDKELGY 500
            P+ VLIN  SASASEI A A+QD+ RA++LG  SFGKG+VQ    L+          G 
Sbjct: 279 LPLVVLINDGSASASEIVAGALQDHKRAVLLGTRSFGKGSVQTLMPLH--------GHGS 330

Query: 501 VQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGESVE-------DNALPWDSIDKA 553
           ++ T  ++Y   G S Q  G+ PDI    +      G +VE         ALP  + DKA
Sbjct: 331 LRLTTARYYTPSGRSIQAVGIEPDIKAAQSKVEPVAGAAVERRSEASLRKALPNPNGDKA 390

Query: 554 K 554
           K
Sbjct: 391 K 391