Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 (NCBI) from Escherichia coli BW25113

 Score =  751 bits (1940), Expect = 0.0
 Identities = 376/656 (57%), Positives = 484/656 (73%), Gaps = 5/656 (0%)

Query: 12  ASLWLAAFSAQALEAKLKPEDLPLLVPEAQHATAAKRVTSRFTRSHYKQFNLDDQFSQAM 71
           A L   A    A+E   + + +P+L  E QHAT ++RVTSRFTRSHY+QF+LD  FS  +
Sbjct: 11  AGLLAIAGQTFAVEDITRADQIPVLKEETQHATVSERVTSRFTRSHYRQFDLDQAFSAKI 70

Query: 72  FERYLEMLDYSRNIFTQADIDSFKAWSLQLDDQLKAGDNQIAYDLYNLSMEKRFERFQYA 131
           F+RYL +LDYS N+   +D++ F     +L D+L++G   + YDLYNL+ ++RFER+QYA
Sbjct: 71  FDRYLNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYDLYNLAQKRRFERYQYA 130

Query: 132 LSLLDQEMTFDADESIELDRTKSPWPKDLKEINELWRQRVKYDALSLKLAGKEWPEIKET 191
           LS+L++ M F  +++  LDR+K+PWPK+  E+N LW  +VK+D LSLKL GK   EI+ET
Sbjct: 131 LSVLEKPMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKFDELSLKLTGKTDKEIRET 190

Query: 192 LDKRYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGA 251
           L +RY  AI+RL QT SEDVF   M AFARE+DPHT+YLSPRN EQF +EM+LSLEGIGA
Sbjct: 191 LTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGA 250

Query: 252 VLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGP 311
           VLQM DDYT+I S+VAGGPAA SK +  GD+I+GVGQ G+ +VDV+GWRLDDVV LIKGP
Sbjct: 251 VLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGP 310

Query: 312 KGSKVKLLVLPEGKDAKSHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPSFYVGLA 371
           KGSKV+L +LP GK  K+  VT+ R++IRLEDRAVK  V     +K+GVL++P FYVGL 
Sbjct: 311 KGSKVRLEILPAGKGTKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLT 370

Query: 372 QDTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYGRVNVNS 431
            D +  L +L+ + V  +I+DLR+NGGGALTEA +LSGLFI +GP+VQVRD+ G+V  +S
Sbjct: 371 DDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDS 430

Query: 432 DTDGSISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIY 491
           DTDG + Y GP+ VL++R+SASASEIFAAAMQDYGRA+++GE +FGKGTVQQ+RSLN IY
Sbjct: 431 DTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIY 490

Query: 492 DLFDK----ELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGESVEDNALPW 547
           D   +     LG VQYTIQKFYR++GGSTQ KGV PDI  PT    +ETGE  EDNALPW
Sbjct: 491 DQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPW 550

Query: 548 DSIDKAKYERLNNFNTIIASLEAKHQQRVANDLEFGFIEQDIAKYRAEKDD-NLLSLNEK 606
           DSID A Y +  +       L  +H  R+A D EF  I +DIA++ A KD  N++SLN  
Sbjct: 551 DSIDAATYVKSGDLTAFEPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYA 610

Query: 607 VRKEESAKADEERLARINQRQKALGKSTYASLQDIPKDYEAPDAYLDESVNIMLDM 662
           VR++E+ + D  RLAR+N+R K  GK     L D+PKDY+ PD YLDE+VNI LD+
Sbjct: 611 VREKENNEDDATRLARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDL 666