Pairwise Alignments

Query, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., carboxy-terminal protease from Agrobacterium fabrum C58

 Score =  141 bits (356), Expect = 6e-38
 Identities = 110/331 (33%), Positives = 168/331 (50%), Gaps = 31/331 (9%)

Query: 203 LTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQMTDDYTII 262
           +T    E + +  +N     +DPH+S+++ ++A   +++      G+G  + M ++   +
Sbjct: 55  VTPPDDEKLVENAINGMLSSLDPHSSFMNAKDANDMRTQTKGEFGGLGIEVTMENELVKV 114

Query: 263 RSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLP 322
            S +   PA+ +  L  GD I  +     D   V G +L+  V+ ++G   + +KL V+ 
Sbjct: 115 ISPMDDTPASRAGILA-GDYISEI-----DGTPVRGLKLEQAVEKMRGAVKTPIKLTVIR 168

Query: 323 EGKDAKSHVVTIVRDKIRLEDRAVKSEVIEKAGKKIGVLEVPSF----YVGLAQDTEKLL 378
           +G D K    T+VRD I +  RAVKS V    G  +G L V SF    Y  L +  +K+ 
Sbjct: 169 KGAD-KPLEFTVVRDVIAV--RAVKSRV---EGDNVGYLRVISFTEKTYDDLEKAIKKIK 222

Query: 379 AELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVR----DSYGRVNVNSDTD 434
           A++ A K+ G ++DLR N GG L +A  +S  F+  G VV  R    D   R N    T 
Sbjct: 223 ADVPADKLKGYVLDLRLNPGGLLDQAINVSDAFLERGEVVSTRGRNPDETRRFNA---TA 279

Query: 435 GSISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYDLF 494
           G ++   P+ VL+N  SASASEI A A+QD  RA ++G  SFGKG+VQ    L       
Sbjct: 280 GDLTDGKPVIVLVNGGSASASEIVAGALQDLRRATVVGTRSFGKGSVQTIIPLG------ 333

Query: 495 DKELGYVQYTIQKFYRIDGGSTQNKGVVPDI 525
             E G ++ T   +Y   G S Q  G+ PDI
Sbjct: 334 --EAGALRLTTALYYTPSGKSIQGTGIEPDI 362