Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) from Variovorax sp. SCN45

 Score =  334 bits (857), Expect = 2e-96
 Identities = 176/344 (51%), Positives = 224/344 (65%), Gaps = 9/344 (2%)

Query: 2   LYRLARAGFFQLDAEKAHDLAISNFKRFTGTPFDLFYRQQLPHRPVQCMGLTFKNPVGLA 61
           LY LAR   F  D E AH+L +    R   TP    Y       P+Q  GL+F N VGLA
Sbjct: 9   LYGLARPFLFGFDPEHAHELTLDGLARTQNTPLACAYSAPRVSDPIQLAGLSFPNRVGLA 68

Query: 62  AGLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVHAEGIINRMGFNNLGVD 121
           AGLDKN  CI+AF AMGFGFVEVGTVTP+ Q GN KPR+FRL   + +INR+GFNN G++
Sbjct: 69  AGLDKNARCIDAFAAMGFGFVEVGTVTPKGQPGNPKPRMFRLPQRDALINRLGFNNEGLE 128

Query: 122 HLVENVKRAKYDG---------IIGINIGKNKDTPIEKGAEDYLICMDKVYPYAGYIAVN 172
             + NV++A++           ++G+NIGKN  TPIE+  +DYL C+D VYP+A Y+ +N
Sbjct: 129 AFLANVQKARFRKAGGAAKQPMLLGLNIGKNAATPIERAVDDYLACLDGVYPHADYVTIN 188

Query: 173 ISSPNTPGLRSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSDDEIQQICQ 232
           ISSPNT  LRSLQ  EALD LL A+  R+  LA +H K  PL +KIAPDL + ++  I  
Sbjct: 189 ISSPNTANLRSLQSDEALDALLGAVAERREALATRHAKRSPLFVKIAPDLDETQVAVIAA 248

Query: 233 SLLKNKIDSVIATNTTLDRSLVEGMKFANEAGGLSGRPLQNRSTEVIKCLYKELGEEIPI 292
           +L ++ +D VIATNTTL R  V+G+  A EAGGLSG P++  S  VI  L   LG   PI
Sbjct: 249 TLKRHGMDGVIATNTTLARDAVKGLPHAEEAGGLSGAPVREASNRVIAQLRAALGSGFPI 308

Query: 293 IGVGGIDSYISAKEKLLAGAKLVQVYSGFIYQGPGLVADIVKNL 336
           IGVGGI S   AK K+ AGA +VQ+Y+G IY+GP LV +  + L
Sbjct: 309 IGVGGILSGADAKAKIAAGADVVQIYTGLIYRGPALVREAAQAL 352