Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., quinone-dependent dihydroorotate dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  251 bits (641), Expect = 2e-71
 Identities = 151/332 (45%), Positives = 199/332 (59%), Gaps = 11/332 (3%)

Query: 3   YRLARAGFFQLDAEKAHDLAISNFKRFTGTPFDLFYRQQLPHRPVQCMGLTFKNPVGLAA 62
           +RLA      LDAE AH L I   K         F  + L    V+  G  F NPVGLAA
Sbjct: 4   FRLAGPLVRLLDAEIAHGLTIGLLKAGLVPRQPTFNPEALK---VRLWGRDFANPVGLAA 60

Query: 63  GLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVHAEGIINRMGFNNLGVDH 122
           G DKN E  +A  A GFGFVE+G+VTPRPQ GN KPR+FRL     +INRMGFNN G++ 
Sbjct: 61  GFDKNAEVPDAMLAQGFGFVEIGSVTPRPQPGNPKPRMFRLPEDRAVINRMGFNNQGLEA 120

Query: 123 LVENVKRAKYDGIIGINIGKNKDTPIEKGAEDYLICMDKVYPYAGYIAVNISSPNTPGLR 182
           +   +      GI+G N+GKNKDT  E  A DY     ++ P + Y+ +N+SSPNTPGLR
Sbjct: 121 VAARLAARPRTGIVGANLGKNKDT--EDAAADYEKGAARLAPLSDYLVINVSSPNTPGLR 178

Query: 183 SLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSDDEIQQICQSLLKNKIDSV 242
           +LQ  + L+ L+   +TR A  AA      PL LKIAPDL+ +++  I    L+  +D +
Sbjct: 179 ALQGRDQLESLVG--RTRAALTAAMPSGAPPLLLKIAPDLAWEDLSDIAAVALEGALDGL 236

Query: 243 IATNTTLDRSLVEGMKFAN--EAGGLSGRPLQNRSTEVIKCLYKELGEEIPIIGVGGIDS 300
           I +NTT+ R   E ++ AN  + GGLSG PL   ST +++ +Y+    ++PIIGVGGI S
Sbjct: 237 IVSNTTVARP--ESLRSANAGQTGGLSGAPLFESSTAMLRRVYELTRGKLPIIGVGGIAS 294

Query: 301 YISAKEKLLAGAKLVQVYSGFIYQGPGLVADI 332
              A  K+ AGA LVQVYS  +Y+GP L+  I
Sbjct: 295 GSEAYAKIRAGASLVQVYSAMVYEGPALITRI 326