Pairwise Alignments

Query, 336 a.a., dihydroorotate dehydrogenase (quinone) from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., Dihydroorotate dehydrogenase (quinone) from Azospirillum sp. SherDot2

 Score =  254 bits (648), Expect = 3e-72
 Identities = 150/340 (44%), Positives = 202/340 (59%), Gaps = 12/340 (3%)

Query: 2   LYRLARAGFFQLDAEKAHDLAISNFKRFTGTPFDLFYRQQLPHRPVQCMGLTFKNPVGLA 61
           LY LA    F+ D E AH L I   K     P      +  P    +  GL   NPVGLA
Sbjct: 4   LYPLAGPLLFRFDPETAHGLTIKALKSGLVPPAR---GRDEPALHTRVWGLDLANPVGLA 60

Query: 62  AGLDKNGECIEAFGAMGFGFVEVGTVTPRPQAGNDKPRLFRLVHAEGIINRMGFNNLGVD 121
           AG DKN E ++A   +GFGFVE G+VTPRPQ GN +PRLFRLV    +INRMGFNN G++
Sbjct: 61  AGFDKNAEVVDAMLNLGFGFVEPGSVTPRPQPGNPRPRLFRLVEQRAVINRMGFNNEGLE 120

Query: 122 HLVENVKR-----AKYDGIIGINIGKNKDTPIEKGAEDYLICMDKVYPYAGYIAVNISSP 176
              + ++R      +  GI+G N+GKNKDT     A+DY+I + ++ P A Y+ VN+SSP
Sbjct: 121 AFAQRLERRRDSAKRAPGIVGANLGKNKDT--VDAADDYVIGVRRLAPLADYLVVNVSSP 178

Query: 177 NTPGLRSLQYGEALDELLAALKTRQAELAAKHDKYVPLALKIAPDLSDDEIQQICQSLLK 236
           NTPGLR+LQ  + L  LL   +  +A  +    +  PL LKIAPDL+ ++   I    L+
Sbjct: 179 NTPGLRALQGRDPLRALLE--RVLEARASCGLTRNPPLLLKIAPDLTVEDKSDIAAVALE 236

Query: 237 NKIDSVIATNTTLDRSLVEGMKFANEAGGLSGRPLQNRSTEVIKCLYKELGEEIPIIGVG 296
           + ID +I +NTT+ R         +EAGGLSGRPL   ST V++ +Y   G ++PI+GVG
Sbjct: 237 SGIDGLIVSNTTIARPDSIPAAMRSEAGGLSGRPLFEASTSVLREIYALTGGKLPIVGVG 296

Query: 297 GIDSYISAKEKLLAGAKLVQVYSGFIYQGPGLVADIVKNL 336
           G+ +   A  K+ AGA LVQ+YS  +Y GP +V  I + L
Sbjct: 297 GVATGEDAYAKIRAGASLVQLYSAMVYAGPAVVHRIRREL 336