Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., 23S rRNA (guanine(2445)-N(2))-methyltransferase (EC 2.1.1.173) from Variovorax sp. SCN45

 Score =  172 bits (436), Expect = 3e-47
 Identities = 120/392 (30%), Positives = 189/392 (48%), Gaps = 40/392 (10%)

Query: 11  GLENLLVEE---LTQLGINDAKPVQAGVKFKATNEQIYRCCLWSRLASRFVRIVAEFKCQ 67
           G+E  L +E   LT     D   ++ GV+ +A      +  L SRLA R +  +A    +
Sbjct: 13  GVEEFLAQEVHALTGRAGQDLLTLRGGVRVRADWRDALKLNLHSRLAQRVLVELAHAPYR 72

Query: 68  NDLDLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGAMKVKDAIVDCF-TKKNLP 126
           ++ DLY     V W  +F   +   ++    +  +++  +  +++KDAI D F  K N  
Sbjct: 73  SENDLYAIANGVAWEIWFTPKQTFKIETTAQHSPLQSLNFATLRIKDAIADRFRAKANGV 132

Query: 127 RPSISKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLAAAIILRSG 186
           RPSI     D  +   L  +   L ID  G  L  RG+R + G APL+ETLAAA++  SG
Sbjct: 133 RPSIETQWPDCRVFAHLTTDTCTLYIDTSGEPLFKRGWRQDKGDAPLKETLAAAMLAASG 192

Query: 187 W-------DASKPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELWASV 239
           W        +++PL DP CGSGT+ IEAA +A  I  G  R ++GFE L  F+  +W ++
Sbjct: 193 WWNPETGEVSAQPLYDPCCGSGTIAIEAAQIARGIPAGSLR-RFGFEKLLPFQAHVWTAI 251

Query: 240 KSEASVQGKRGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVKRPEN 299
           K EA    + GV       +G D  +R++  A+ NA RAGV + + F  GDA  ++R   
Sbjct: 252 KKEA----EAGVADNGVAIFGSDVSHRMVDFAERNAERAGVAQAVEFRGGDA--LQRMPP 305

Query: 300 FAEGIVICNPPYGERLGTHPGLIA--------------------LYTAFGAQLKAEFGGC 339
              G+++ NPPYGER+    G +A                     +    A  K  + G 
Sbjct: 306 VEAGVIMLNPPYGERI--EVGGVAGTGRSGARESAQTEQGDGGEFFPQLAAHWKKNYAGW 363

Query: 340 HASIFSSSDELLSCLRMRADKQFKLNNGALPC 371
            A + +   +L   +R++  ++  + NG + C
Sbjct: 364 TAWVLTPDLKLPKQMRLKESRRVPMWNGPIEC 395