Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  813 bits (2099), Expect = 0.0
 Identities = 401/705 (56%), Positives = 511/705 (72%), Gaps = 7/705 (0%)

Query: 1   MNQYLAVTSNGLENLLVEELTQLGINDAKPVQAGVKFKATNEQIYRCCLWSRLASRFVRI 60
           MN   A T+ GLE LL  EL +LG    + VQ GV F+     IY+  +WSRLASR +  
Sbjct: 1   MNSLFASTARGLEELLKTELEKLGAVGCQVVQGGVHFQGDTRLIYQSLMWSRLASRIILP 60

Query: 61  VAEFKCQNDLDLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGAMKVKDAIVDCF 120
           + E K  +DLDLYL   ++NW   F+      V F+G N  IRNSQYGAMKVKDAIVD F
Sbjct: 61  MGECKVYSDLDLYLGVQAINWTEIFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120

Query: 121 TKKNLPRPSISKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLAAA 180
           T+KNLPRP++ ++  DL I+V L+KE A + +D+ G GLH RGYR   G AP++ETLAAA
Sbjct: 121 TRKNLPRPNVDRESPDLRINVWLNKETASIALDLSGDGLHLRGYRDRTGLAPIKETLAAA 180

Query: 181 IILRSGWDASKPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELWASVK 240
           I++RSGW    PLLDPMCGSGTLLIEAAM A + APGL R  WGF      +  +W  VK
Sbjct: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMWATDRAPGLHRGHWGFSGWAQHDETIWQEVK 240

Query: 241 SEASVQGKRGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVKRP-EN 299
           +EA  + ++G+ +  +HFYG D+D RV++ A+ NARRAG+ ELI+F + D A++  P   
Sbjct: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIERARSNARRAGIGELITFEVKDVAQLSNPLPK 300

Query: 300 FAEGIVICNPPYGERLGTHPGLIALYTAFGAQLKAEFGGCHASIFSSSDELLSCLRMRAD 359
              G VI NPPYGERL + P LIAL++  G  +K +FGG + S+FS+S +LL  L++RAD
Sbjct: 301 GPYGTVISNPPYGERLDSEPALIALHSLLGRTMKNQFGGWNLSLFSASPDLLGSLQLRAD 360

Query: 360 KQFKLNNGALPCHQKNYTIAMREQNSVSNEGTQEILIAPDFANRLKKNFNKIGKWAKREG 419
           KQFK  NG L C QKNY IA  E  + S   T    +A D+ANRL+KN  K+ KWA++EG
Sbjct: 361 KQFKAKNGPLDCVQKNYHIA--ETTADSKPAT----VAEDYANRLRKNLKKLEKWARQEG 414

Query: 420 LDCFRLYDADLPEYNVAIDVYQDHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQVLDVDA 479
           ++C+RLYDADLPEYNVA+D Y D  +IQEYA PK +  +KA++RL DII A + VL +  
Sbjct: 415 IECYRLYDADLPEYNVAVDRYGDWAVIQEYAPPKTVDAQKARQRLFDIIAATLSVLGIPP 474

Query: 480 NNVVLKVRERQKGTSQYEKLGQQAQTMQITEYGVKLIVNLYDYLDTGLFLDHKITRRRLG 539
           N +VLK RERQKG +QY+K+ ++ + ++++EY  +L VNL DYLDTGLFLDH+I RR LG
Sbjct: 475 NKLVLKTRERQKGKNQYQKMSEKGEFLEVSEYNARLWVNLTDYLDTGLFLDHRIARRMLG 534

Query: 540 QMAQGKDFLNLFAYTGSATVHAACGGAKSTTTVDMSKTYLEWAKENMQLNGQVGRQHQYV 599
           +M++GKDFLNLF+YTGSA+VHA  GGA+STTTVDMS+TYLEWA+ N++LNG  GR H+ +
Sbjct: 535 EMSKGKDFLNLFSYTGSASVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLSGRAHRLI 594

Query: 600 QADCLQWLANAQSQYDLIFIDPPTFSNSKRMEQTFDVQRDHVTLMTNLKRLLRPEGTIVF 659
           QADCL WL  A  Q+DLIFIDPPTFSNSKRME++FDVQRDHV LM +LKRLLR  GTI+F
Sbjct: 595 QADCLGWLREANEQFDLIFIDPPTFSNSKRMEESFDVQRDHVALMKDLKRLLRKGGTIMF 654

Query: 660 SNNKRHFKMDMEALHALGLNAQNISHQTLPLDFERNKQIHNCWLI 704
           SNNKR F+MD+E L  LGL AQ I+ +TL  DF RN+QIHNCWLI
Sbjct: 655 SNNKRGFRMDLEGLAELGLTAQEITQKTLSPDFARNRQIHNCWLI 699