Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., predicted methyltransferase (NCBI) from Escherichia coli BW25113

 Score =  827 bits (2135), Expect = 0.0
 Identities = 403/706 (57%), Positives = 512/706 (72%), Gaps = 7/706 (0%)

Query: 1   MNQYLAVTSNGLENLLVEELTQLGINDAKPVQAGVKFKATNEQIYRCCLWSRLASRFVRI 60
           MN   A T+ GLE LL  EL  LG  + + VQ GV FK     +Y+  +WSRLASR +  
Sbjct: 1   MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60

Query: 61  VAEFKCQNDLDLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGAMKVKDAIVDCF 120
           + E K  +DLDLYL   ++NW   F+      V F+G N  IRNSQYGAMKVKDAIVD F
Sbjct: 61  LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120

Query: 121 TKKNLPRPSISKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLAAA 180
           T+KNLPRP++ +D  D+ ++V LHKE A + +D+ G GLH RGYR  AG AP++ETLAAA
Sbjct: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180

Query: 181 IILRSGWDASKPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELWASVK 240
           I++RSGW    PLLDPMCGSGTLLIEAAM+A + APGL R +WGF      +  +W  VK
Sbjct: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240

Query: 241 SEASVQGKRGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVKRP-EN 299
           +EA  + ++G+ +  +HFYG D+D RV+Q A+ NAR AG+ ELI+F + D A++  P   
Sbjct: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300

Query: 300 FAEGIVICNPPYGERLGTHPGLIALYTAFGAQLKAEFGGCHASIFSSSDELLSCLRMRAD 359
              G V+ NPPYGERL + P LIAL++  G  +K +FGG + S+FS+S +LLSCL++RAD
Sbjct: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360

Query: 360 KQFKLNNGALPCHQKNYTIAMREQNSVSNEGTQEILIAPDFANRLKKNFNKIGKWAKREG 419
           KQ+K  NG L C QKNY +A       S   ++  ++A D+ NRL+KN  K  KWA++EG
Sbjct: 361 KQYKAKNGPLDCVQKNYHVAE------STPDSKPAMVAEDYTNRLRKNLKKFEKWARQEG 414

Query: 420 LDCFRLYDADLPEYNVAIDVYQDHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQVLDVDA 479
           ++C+RLYDADLPEYNVA+D Y D +++QEYA PK I   KA++RL DII A I VL +  
Sbjct: 415 IECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAP 474

Query: 480 NNVVLKVRERQKGTSQYEKLGQQAQTMQITEYGVKLIVNLYDYLDTGLFLDHKITRRRLG 539
           N +VLK RERQKG +QY+KLG++ + +++TEY   L VNL DYLDTGLFLDH+I RR LG
Sbjct: 475 NKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLG 534

Query: 540 QMAQGKDFLNLFAYTGSATVHAACGGAKSTTTVDMSKTYLEWAKENMQLNGQVGRQHQYV 599
           QM++GKDFLNLF+YTGSATVHA  GGA+STTTVDMS+TYLEWA+ N++LNG  GR H+ +
Sbjct: 535 QMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI 594

Query: 600 QADCLQWLANAQSQYDLIFIDPPTFSNSKRMEQTFDVQRDHVTLMTNLKRLLRPEGTIVF 659
           QADCL WL  A  Q+DLIFIDPPTFSNSKRME  FDVQRDH+ LM +LKRLLR  GTI+F
Sbjct: 595 QADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654

Query: 660 SNNKRHFKMDMEALHALGLNAQNISHQTLPLDFERNKQIHNCWLIT 705
           SNNKR F+MD++ L  LGL AQ I+ +TL  DF RN+QIHNCWLIT
Sbjct: 655 SNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700