Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL from Erwinia tracheiphila SCR3

 Score =  808 bits (2086), Expect = 0.0
 Identities = 394/707 (55%), Positives = 506/707 (71%), Gaps = 7/707 (0%)

Query: 1   MNQYLAVTSNGLENLLVEELTQLGINDAKPVQAGVKFKATNEQIYRCCLWSRLASRFVRI 60
           MN   A T+ GLE LL  EL  LG +D + VQ GV +K  +  +Y+  LWSRLASR +  
Sbjct: 1   MNSLFASTARGLEELLKSELEALGASDCQVVQGGVHYKGDDRLMYQSLLWSRLASRILLP 60

Query: 61  VAEFKCQNDLDLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGAMKVKDAIVDCF 120
           + E    +DLDLYL   +VNW   F S K   V F+G N  IRNSQYGA+KVKDAIVD F
Sbjct: 61  LTECGIYSDLDLYLGVQAVNWPAMFGSDKTFAVHFSGLNEVIRNSQYGALKVKDAIVDSF 120

Query: 121 TKKNLPRPSISKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLAAA 180
           T+KNLPRP + ++  D+ I+V L+ + A + +D+ G GLH RGYR + G+APL+E LAAA
Sbjct: 121 TRKNLPRPDVDREQPDIRINVWLYNDKASIALDLSGDGLHQRGYRQQTGQAPLKENLAAA 180

Query: 181 IILRSGWDASKPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELWASVK 240
           ++LRSGW     ++DPMCGSGTLLIEAAM+A++ APGL R  WGF     F   LW  +K
Sbjct: 181 VVLRSGWKPGSTMVDPMCGSGTLLIEAAMIASDRAPGLHRNHWGFNGWSQFNATLWRELK 240

Query: 241 SEASVQGKRGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVKRPENF 300
           SEA  +  RG++   + FYG DND +V++ A+ NAR+AG+ +L+ FT  D  K+  P+  
Sbjct: 241 SEAQARASRGLRATTSRFYGYDNDPKVIERARVNARKAGLADLVGFTAQDVLKLTNPQQE 300

Query: 301 AE-GIVICNPPYGERLGTHPGLIALYTAFGAQLKAEFGGCHASIFSSSDELLSCLRMRAD 359
              G ++ NPPYGERL + P LIALY+  G  +K  F G + S+FS+S ELLSCL++RA+
Sbjct: 301 GSVGTLLSNPPYGERLESKPALIALYSQLGRLMKQHFAGWNLSLFSASPELLSCLQLRAE 360

Query: 360 KQFKLNNGALPCHQKNYTIAMREQNSVSNEGTQEILIAPDFANRLKKNFNKIGKWAKREG 419
           +QFK  NG L C QKNY +A       S   T +  IA D+ANRL+KN  K+GKWA + G
Sbjct: 361 RQFKAKNGPLDCVQKNYQLA------ASTMSTGQAKIAEDYANRLRKNLKKLGKWASQSG 414

Query: 420 LDCFRLYDADLPEYNVAIDVYQDHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQVLDVDA 479
           ++C+RLYDADLPEYNVA+D Y D +++QEYA PK I   KA++RL D+I A + VL++ A
Sbjct: 415 IECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAAKARQRLFDVIAATLSVLELPA 474

Query: 480 NNVVLKVRERQKGTSQYEKLGQQAQTMQITEYGVKLIVNLYDYLDTGLFLDHKITRRRLG 539
           N +VLK RERQKG SQY+KLG++    ++ E+  KL VNL DYLDTGLFLDH+I R+ LG
Sbjct: 475 NRLVLKTRERQKGKSQYQKLGEKGDFFEVAEFNAKLWVNLTDYLDTGLFLDHRIARKMLG 534

Query: 540 QMAQGKDFLNLFAYTGSATVHAACGGAKSTTTVDMSKTYLEWAKENMQLNGQVGRQHQYV 599
           +M++GKDFLNLFAYTG+A+VHA  GGA+STTTVDMS+TYLEWA+ N++LNG  GRQH+ +
Sbjct: 535 EMSRGKDFLNLFAYTGTASVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRQHRLI 594

Query: 600 QADCLQWLANAQSQYDLIFIDPPTFSNSKRMEQTFDVQRDHVTLMTNLKRLLRPEGTIVF 659
           QADCL WL  +   YDLIFIDPPTFSNSKRME++FDVQRDH+ L+ NL RLLR  GTI+F
Sbjct: 595 QADCLSWLNESDEIYDLIFIDPPTFSNSKRMEESFDVQRDHLLLLKNLHRLLRKGGTIMF 654

Query: 660 SNNKRHFKMDMEALHALGLNAQNISHQTLPLDFERNKQIHNCWLITH 706
           SNNKR FKMD + L  L  +AQ+I+  T   DF RN+QIHNCWLITH
Sbjct: 655 SNNKRGFKMDHDGLRELHFSAQDITVGTQSQDFARNRQIHNCWLITH 701