Pairwise Alignments

Query, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., Ribosomal RNA large subunit methyltransferase K/L from Alteromonas macleodii MIT1002

 Score =  637 bits (1644), Expect = 0.0
 Identities = 329/708 (46%), Positives = 455/708 (64%), Gaps = 16/708 (2%)

Query: 1   MNQYLAVTSNGLENLLVEELTQLGINDAKPVQAG--VKFKATNEQIYRCCLWSRLASRFV 58
           MN  L  TS GL+ LL +E+ +L   DA+  Q    ++F+ + E  Y+ CLWSRLA+R V
Sbjct: 1   MNTILVTTSRGLDELLKQEVLRL-CPDAQVKQGPGTIQFEGSKEDAYKLCLWSRLANRVV 59

Query: 59  RIVAEFKCQNDLDLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGAMKVKDAIVD 118
            ++A  K  +   LY +   ++W     S   L V F GTN  I+N+Q+GA++VKDAIVD
Sbjct: 60  WVLASGKAGDADALYNTAMGIDWQMQMDSRHTLSVQFIGTNFAIKNTQFGAVRVKDAIVD 119

Query: 119 CFTKKNLPRPSISKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLA 178
            F ++ LPRPS+ +   D+ ++ RLH++N +LGID+ G+ LH R YR E G APL+E +A
Sbjct: 120 SFVEQGLPRPSVERKSPDISVYARLHRDNVILGIDLAGASLHQRAYRQETGDAPLKEHIA 179

Query: 179 AAIILRSGW--DASKPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELW 236
           +A+++RSGW  +   PL+D MCGSGT+ IEAA +A NIAPG++R  WGF      E +LW
Sbjct: 180 SAMLMRSGWTENTDAPLVDLMCGSGTIAIEAAYIARNIAPGIKRMYWGFTKWLGHEEKLW 239

Query: 237 ASVKSEASVQGKRGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVKR 296
             +  +A    K     +    Y  D   +++  AK NA  AGV   ISF+  DA K   
Sbjct: 240 DDLVEQAISAQKPSCSGI----YAGDFSRKMVAIAKANADFAGVFNDISFSQQDATK-SS 294

Query: 297 PENFAEGIVICNPPYGERLGTHPGLIALYTAFGAQLKAEFGGCHASIFSSSDELLSCLRM 356
           P     G V+ NPPYGERLG    LI L++ +G + K  + G H S+ SS+ +LL  L++
Sbjct: 295 PPVATPGYVVSNPPYGERLGELTSLIPLFSDWGKRFKEAWKGWHVSLLSSNRDLLRVLKL 354

Query: 357 RADKQFKLNNGALPCHQKNYTIAMREQNSVSNEGTQEILIAPDFANRLKKNFNKIGKWAK 416
           RA K + +NNG L C   NY +        S + +       +FANRLKKN  ++  W K
Sbjct: 355 RATKDYAMNNGKLECRLANYVLDEENTVQFSEDASNH-----EFANRLKKNLKRMKGWIK 409

Query: 417 REGLDCFRLYDADLPEYNVAIDVYQDHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQVLD 476
               +C+R+YDADLP+YNVA+D Y D L++QEYA PK + E+KA++RL +++     V  
Sbjct: 410 NANTNCYRIYDADLPDYNVAVDRYGDWLVVQEYAPPKTVSEDKARKRLQEVLLHLPAVTG 469

Query: 477 VDANNVVLKVRERQKGTSQYEKLGQQAQTMQITEYGVKLIVNLYDYLDTGLFLDHKITRR 536
           V    + LKVR +QKGT QYEK+ Q    M++ E G + +VNL DYLDTGLFLDH+ TR+
Sbjct: 470 VSPKQIALKVRSQQKGTKQYEKINQTGDMMEVFENGARFLVNLTDYLDTGLFLDHRNTRQ 529

Query: 537 RLGQMAQGKDFLNLFAYTGSATVHAACGGAKSTTTVDMSKTYLEWAKENMQLNGQVGRQH 596
           ++  ++QGKD LNLF+YTGS +V AA GGAKS TTVDMS TYLEWAK+N+ LN ++   H
Sbjct: 530 KVQALSQGKDVLNLFSYTGSVSVFAAKGGAKSVTTVDMSNTYLEWAKKNVALN-KLTAPH 588

Query: 597 QYVQADCLQWLANAQSQYDLIFIDPPTFSNSKRMEQTFDVQRDHVTLMTNLKRLLRPEGT 656
            ++QADC  WL   + +YDLIFIDPP+FSNSKRM+ T+DVQRDHV ++T+ K  L+ +G 
Sbjct: 589 AFIQADCTTWLGTHKGKYDLIFIDPPSFSNSKRMQNTWDVQRDHVKMLTDAKACLKEQGI 648

Query: 657 IVFSNNKRHFKMDMEALHALGLNAQNISHQTLPLDFERNKQIHNCWLI 704
           I+FSNNKR FK+D  A+  LGL+  NI+  T+P DF R   IH CW++
Sbjct: 649 IIFSNNKRGFKLDETAMSELGLSVDNITKDTIPEDFARKGNIHQCWVL 696