Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Rhodanobacter sp000427505 FW510-R12

 Score =  322 bits (826), Expect = 2e-92
 Identities = 190/541 (35%), Positives = 302/541 (55%), Gaps = 25/541 (4%)

Query: 31  RVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPPRNQAGTVFDYVSGG 90
           ++ L+G NGAGKST++K++AG      G+ +      +  L Q+P  N   TV + V  G
Sbjct: 35  KIGLLGVNGAGKSTVLKIMAGVDTDFQGEARAQPGTKIGYLAQEPDLNPEKTVREVVEEG 94

Query: 91  LQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLE----VSGAWRFEDRIKNVLGSL 146
           +  + +  K  ++     A D ++   +KLA  QEQLE     + A   E +++    +L
Sbjct: 95  VSVVLDAQKRLEEVYAAYAEDGAD--FDKLAKEQEQLENLLAANDAHALERQLEVAADAL 152

Query: 147 KLDG-HTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVTTIEWLEGFLKDFRGS 205
           +L     K+  LSGG +R+ AL R L   PD+LLLDEPTNHLD  +++WLE FL D+ G+
Sbjct: 153 RLPPWEAKVGPLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAESVDWLEQFLHDYPGT 212

Query: 206 IIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLRVEELQNAEFDKKLAQ 265
           ++ ++HDR F+ + A  I++LDRG+   + G+Y  +L +K+  L+ E  Q     K +A+
Sbjct: 213 VVAVTHDRYFLDNAAEWILELDRGRGIPWKGNYTEWLEQKDARLKQEANQEKSRQKAIAK 272

Query: 266 EEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQIDDSNRSGKIVFEAENL 325
           E  W+R   K R+++ + R+   + L     +RR    ++   I    R G+ V E +N+
Sbjct: 273 ELEWVRSAAKGRQSKGKARLARFEELNSVDYQRRNETNEIF--IPPGERLGQEVIEFKNV 330

Query: 326 HYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVA 385
             S G + +++  SF +  G  I +IGPNG GKSTL+K+++G   PDSG+V  G   ++A
Sbjct: 331 TKSFGDRVLIEDLSFKVPPGAIIGVIGPNGAGKSTLMKMIMGKETPDSGEVKLGHTTKLA 390

Query: 386 YFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFSPKRARTPVKALSGGE 445
           Y DQ RE LDP+  V   ++ G   + +G     + +Y+  F F     +  V +LSGGE
Sbjct: 391 YVDQSREALDPKNNVWQEVSGGSDILTIGNFEIQSRAYIGRFNFKGTDQQKIVGSLSGGE 450

Query: 446 KNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLLVSHDREFVDNTVT 505
           + RL +A+ LL+  N+L+LDEP+NDLD+ETL  LE+ L  + G  +++SHDR F+D   T
Sbjct: 451 RGRLHMAKTLLQGGNVLLLDEPSNDLDVETLRALEDALLEFPGCAMVISHDRWFLDRIAT 510

Query: 506 SSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAAENIVKKEKVVEESPKSAPSKTKQKKL 565
               FEGD  +E F G Y++ +                KK ++ +E  +  P + K KKL
Sbjct: 511 HIIAFEGDSHVEFFPGNYNEYEAD--------------KKRRLGDEGAR--PHRVKYKKL 554

Query: 566 S 566
           +
Sbjct: 555 A 555



 Score =  105 bits (263), Expect = 4e-27
 Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 41/278 (14%)

Query: 332 KTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQYR 391
           + I+   S +   G +I L+G NG GKST+LKI+ G      G+       ++ Y  Q  
Sbjct: 20  RQIIKDISLSFFPGAKIGLLGVNGAGKSTVLKIMAGVDTDFQGEARAQPGTKIGYLAQEP 79

Query: 392 ELLDPEKTV-------------------------------IDNLADGKQEV--MVGGRLR 418
           + L+PEKTV                                D LA  ++++  ++     
Sbjct: 80  D-LNPEKTVREVVEEGVSVVLDAQKRLEEVYAAYAEDGADFDKLAKEQEQLENLLAANDA 138

Query: 419 HALSYLQDFLFSPKRA---RTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIET 475
           HAL    +      R       V  LSGGEK R+ L R+LL   ++L+LDEPTN LD E+
Sbjct: 139 HALERQLEVAADALRLPPWEAKVGPLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAES 198

Query: 476 LELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGD-GKIEEFVGGYHDAQQQRAQVL 534
           ++ LE+ L +Y GT++ V+HDR F+DN   + WI E D G+   + G Y +  +Q+   L
Sbjct: 199 VDWLEQFLHDYPGTVVAVTHDRYFLDN--AAEWILELDRGRGIPWKGNYTEWLEQKDARL 256

Query: 535 QSRAAENIVKKEKVVEESP-KSAPSKTKQKKLSYKLQR 571
           +  A +   +++ + +E     + +K +Q K   +L R
Sbjct: 257 KQEANQEKSRQKAIAKELEWVRSAAKGRQSKGKARLAR 294



 Score = 95.9 bits (237), Expect = 4e-24
 Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 53/258 (20%)

Query: 3   LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
           +I   N   +FGD  L++   F +     + ++G NGAGKSTLMK++ G+   D G++++
Sbjct: 324 VIEFKNVTKSFGDRVLIEDLSFKVPPGAIIGVIGPNGAGKSTLMKMIMGKETPDSGEVKL 383

Query: 63  MQDVVVSRLEQ-----DPPRNQAGTVFDYVSGG--LQGIGE---QLKIYQDQLDLVATDP 112
                ++ ++Q     DP  N    V+  VSGG  +  IG    Q + Y  + +   TD 
Sbjct: 384 GHTTKLAYVDQSREALDPKNN----VWQEVSGGSDILTIGNFEIQSRAYIGRFNFKGTDQ 439

Query: 113 SESNINKLAHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALA 172
                                      + ++GS           LSGG + +  +A+ L 
Sbjct: 440 ---------------------------QKIVGS-----------LSGGERGRLHMAKTLL 461

Query: 173 CDPDVLLLDEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLD-RGQL 231
              +VLLLDEP+N LDV T+  LE  L +F G  + ISHDR F+  +AT I+  +    +
Sbjct: 462 QGGNVLLLDEPSNDLDVETLRALEDALLEFPGCAMVISHDRWFLDRIATHIIAFEGDSHV 521

Query: 232 SSFPGDYENYLTEKEEML 249
             FPG+Y  Y  +K+  L
Sbjct: 522 EFFPGNYNEYEADKKRRL 539