Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., ABC transporter ATP-binding protein uup from Xanthobacter sp. DMC5

 Score =  452 bits (1164), Expect = e-131
 Identities = 256/643 (39%), Positives = 369/643 (57%), Gaps = 45/643 (6%)

Query: 3   LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
           L+ + +  L FG  PLLD A+ ++   ERVCLVGRNG+GKSTL+KV AG +  D G    
Sbjct: 5   LVLLQDIHLRFGATPLLDGAELSVSAGERVCLVGRNGSGKSTLLKVAAGLVEPDSGTRFF 64

Query: 63  MQDVVVSRLEQDPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAH 122
                V  L+Q+P  +   T   YV  GL G G+                          
Sbjct: 65  QPGTTVRYLQQEPDFSGYATTLAYVEAGL-GPGDDAY----------------------- 100

Query: 123 IQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLDE 182
                          R + +L  L L G      LSGG  R+AALAR +A +PDVLLLDE
Sbjct: 101 ---------------RAQYLLTELGLTGQEDPAHLSGGEARRAALARVIAPEPDVLLLDE 145

Query: 183 PTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYL 242
           PTNHLD+  IEWLE  LK  + +++ ISHDR F+++++   V LDRGQ       +  + 
Sbjct: 146 PTNHLDLPAIEWLESELKGLKSAMVLISHDRRFLETLSRATVWLDRGQTRRLEQGFGAFE 205

Query: 243 TEKEEMLRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQ 302
             ++E+L  EE +  + D+K+  E  W+R G+ ARR RN  R+  L  +R++R + R   
Sbjct: 206 AWRDEVLEQEETERHKLDRKIVAELDWLRYGVTARRKRNVRRLGLLHSMRKDRRDERRAV 265

Query: 303 GKVNLQIDDSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLL 362
           G V L + ++  SGK+V EA+++  + G + +V  FS  I+RGDRI +IGPNG GK+TL+
Sbjct: 266 GNVKLAVSEAEASGKLVIEAKHIAKAFGEREVVKDFSTRILRGDRIGIIGPNGAGKTTLI 325

Query: 363 KILLGDLQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNL-ADGKQEVMVGGRLRHAL 421
           K+L G+L PDSG V  GT LEVA  DQ R  LDP  T+ D L   G  +V VGG  +H +
Sbjct: 326 KLLTGELAPDSGTVKLGTNLEVASLDQKRAALDPGTTLRDALTGGGSDQVQVGGAPKHVM 385

Query: 422 SYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEE 481
            YL+DFLF+P++A  P+  LSGGE+ RL+LAR L   +N+LVLDEPTNDLD+ETL+LL+E
Sbjct: 386 GYLKDFLFTPEQANAPLSVLSGGERGRLMLARALALPSNVLVLDEPTNDLDLETLDLLQE 445

Query: 482 LLANYQGTLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAAEN 541
           ++A+Y GT++LVSHDR+F+D TV+S  + EGDG   E+ GGY D   QR + +++R    
Sbjct: 446 MVADYPGTVILVSHDRDFLDRTVSSVIMAEGDGVFREYAGGYSDMLSQRGRGVEARDKSA 505

Query: 542 IVKKEKVVEESPKS-----APSKTKQKKLSYKLQRELEALPQRLEELEVEIAALQDIVNS 596
              K K  E+ P +       +   +++LS+  Q  L+ LP+ +++L   +  L   +  
Sbjct: 506 PAAKAKGGEQKPDAGKGTGGAAAGGKRRLSFHEQHALKTLPKTMDDLRANLEKLAAEIAD 565

Query: 597 PDFFSQPVDKTQPILDKLTATEQELEIAFERWEELEAMQQESE 639
           P  +++   +       L  T+  L+ A E W  LE +++E E
Sbjct: 566 PALYARDPARFDKASAALAETQAALDAAEEEWLRLEILKEELE 608