Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  316 bits (810), Expect = 2e-90
 Identities = 185/530 (34%), Positives = 300/530 (56%), Gaps = 13/530 (2%)

Query: 18  LLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPPR 77
           +L +   +     ++ ++G NG+GKSTL+K++AG     +G+ + M D+ +  L Q+P  
Sbjct: 21  ILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFEGEARPMPDLNIGYLPQEPIL 80

Query: 78  NQAGTVFDYVSGGLQGIGEQLKIYQDQLDLV--ATDPSESNINKLAHIQEQLEV----SG 131
           +   TV + V   +  I    K  Q +LD V  A    +++ +KLA  Q +LE       
Sbjct: 81  DPTKTVREVVEEAVSVI----KNAQARLDEVYAAYAEEDADFDKLAAEQAKLEAILQAGD 136

Query: 132 AWRFEDRIKNVLGSLKLDG-HTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVT 190
               E +++    +L+L     K+  LSGG +R+ AL R L   PD+LLLDEPTNHLD  
Sbjct: 137 GHNLERQLEVAADALRLPAWDAKVEHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDAD 196

Query: 191 TIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLR 250
           ++ WLE FL DF G+++ I+HDR F+ ++A  I++LDRG    + G+Y  +L  K + L 
Sbjct: 197 SVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPYEGNYSGWLEAKSDRLA 256

Query: 251 VEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQID 310
            E  Q +  +K + +E  W+R+G KAR+++++ R++  + ++ +  ++R    ++   I 
Sbjct: 257 AESKQQSAHEKAMKEELEWVRKGAKARQSKSKARLQRFEEMQSQEFQKRSETNEI--YIP 314

Query: 311 DSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQ 370
              R G  V E +N+    G + ++D  SF++ +G  + +IG NG GKSTL ++L+G   
Sbjct: 315 AGPRLGDKVIEFKNVSKGYGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKET 374

Query: 371 PDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFS 430
           PDSG +  G  +++A  DQ RE LD  KTV   ++DG  ++ +G     + +Y+  F F 
Sbjct: 375 PDSGTIEVGETVQLACVDQSREDLDGSKTVFQQISDGSDQIRIGNYEIPSRTYVGRFNFK 434

Query: 431 PKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTL 490
               +  VK LSGGE+ RL LA  L +  N+L+LDEP+NDLD+ETL  LEE L ++ G  
Sbjct: 435 GGDQQKFVKDLSGGERGRLHLALTLKEGGNVLLLDEPSNDLDVETLRSLEEALLDFPGAA 494

Query: 491 LLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAAE 540
           +++SHDR F+D   T    +E D +   F G Y + +  R + L   AA+
Sbjct: 495 IVISHDRWFLDRVATHILAYEDDSQAVFFEGNYTEYEADRKKRLGDAAAQ 544



 Score =  106 bits (265), Expect = 2e-27
 Identities = 94/302 (31%), Positives = 141/302 (46%), Gaps = 49/302 (16%)

Query: 332 KTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQYR 391
           + I+   S +   G +I ++G NG GKSTLLKI+ G      G+      L + Y  Q  
Sbjct: 19  REILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFEGEARPMPDLNIGYLPQ-E 77

Query: 392 ELLDPEKTV-------------------------------IDNLA--DGKQEVMV----G 414
            +LDP KTV                                D LA    K E ++    G
Sbjct: 78  PILDPTKTVREVVEEAVSVIKNAQARLDEVYAAYAEEDADFDKLAAEQAKLEAILQAGDG 137

Query: 415 GRLRHALSYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIE 474
             L   L    D L  P      V+ LSGGEK R+ L R+LL A ++L+LDEPTN LD +
Sbjct: 138 HNLERQLEVAADALRLP-AWDAKVEHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDAD 196

Query: 475 TLELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDG----KIEEFVGGYHDAQQQR 530
           ++  LE  L ++ GT++ ++HDR F+DN   + WI E D       E    G+ +A+  R
Sbjct: 197 SVAWLEHFLHDFPGTVVAITHDRYFLDN--VAGWILELDRGAGIPYEGNYSGWLEAKSDR 254

Query: 531 --AQVLQSRAAENIVKKE-KVVEESPKSAPSKTKQKKLSYKLQRELEALPQRLEELEVEI 587
             A+  Q  A E  +K+E + V +  K+  SK+K +   ++ + + +   +R E  E+ I
Sbjct: 255 LAAESKQQSAHEKAMKEELEWVRKGAKARQSKSKARLQRFE-EMQSQEFQKRSETNEIYI 313

Query: 588 AA 589
            A
Sbjct: 314 PA 315



 Score =  101 bits (252), Expect = 8e-26
 Identities = 79/249 (31%), Positives = 124/249 (49%), Gaps = 35/249 (14%)

Query: 3   LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
           +I   N    +GD  L+D+  F++ +   V ++G NGAGKSTL ++L G+   D G ++V
Sbjct: 323 VIEFKNVSKGYGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKETPDSGTIEV 382

Query: 63  MQDVVVSRLEQD-PPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLA 121
            + V ++ ++Q     + + TVF  +S G     +Q++I   ++      PS + + +  
Sbjct: 383 GETVQLACVDQSREDLDGSKTVFQQISDG----SDQIRIGNYEI------PSRTYVGRF- 431

Query: 122 HIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLD 181
                              N  G    D    + DLSGG + +  LA  L    +VLLLD
Sbjct: 432 -------------------NFKGG---DQQKFVKDLSGGERGRLHLALTLKEGGNVLLLD 469

Query: 182 EPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDL-DRGQLSSFPGDYEN 240
           EP+N LDV T+  LE  L DF G+ I ISHDR F+  +AT I+   D  Q   F G+Y  
Sbjct: 470 EPSNDLDVETLRSLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSQAVFFEGNYTE 529

Query: 241 YLTEKEEML 249
           Y  ++++ L
Sbjct: 530 YEADRKKRL 538